Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2700 84.2 1e-11 >seq2700 Length=5623 Score = 84.2 bits (92), Expect = 1e-11 Identities = 104/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 33235 AAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTAC 33294 ||| || || || ||||| || | |||||||||||||| || |||| | |||||| Sbjct 552 AAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTCGCTTTTAC 611 Query 33295 TGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTT 33354 ||| |||||| || || || || || || || ||||| || || || | ||| || Sbjct 612 ATTTTCAATCGTATCCGAGGATTCGACCTCAAGTGTGATCGTCTTACCAGTTAAAGTCTT 671 Query 33355 TACGAAAATTTGCAT-GTTTA 33374 ||||||||||||||| ||||| Sbjct 672 TACGAAAATTTGCATAGTTTA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318600936641856