Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq2700 84.2 1e-11
>seq2700
Length=5623
Score = 84.2 bits (92), Expect = 1e-11
Identities = 104/141 (74%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 33235 AAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTAC 33294
||| || || || ||||| || | |||||||||||||| || |||| | ||||||
Sbjct 552 AAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTCGCTTTTAC 611
Query 33295 TGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTT 33354
||| |||||| || || || || || || || ||||| || || || | ||| ||
Sbjct 612 ATTTTCAATCGTATCCGAGGATTCGACCTCAAGTGTGATCGTCTTACCAGTTAAAGTCTT 671
Query 33355 TACGAAAATTTGCAT-GTTTA 33374
||||||||||||||| |||||
Sbjct 672 TACGAAAATTTGCATAGTTTA 692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318600936641856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |