Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq6796 86.0 7e-12
seq17479 82.4 8e-11
>seq6796
Length=2897
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071
|||| | |||||||||| |||||| | ||||||||||| ||||||||||||||||||
Sbjct 2 CGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTATACTA 61
Query 57072 CCGAGGATTGAA 57083
||||||| ||||
Sbjct 62 CCGAGGACTGAA 73
>seq17479
Length=1317
Score = 82.4 bits (90), Expect = 8e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | |||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 1248 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 1307
Query 57067 TACTACCGAG 57076
||||||||||
Sbjct 1308 TACTACCGAG 1317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542904037844480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |