Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq21486 123 6e-23
seq39641 98.7 2e-15
>seq21486
Length=1089
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||| || ||||| ||||| |||| || ||||| | || ||
Sbjct 156 CGAAGACGAAGAACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCCGACAGCGTA 215
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||| || |||||||| ||||| | ||||| || || || ||| ||
Sbjct 216 CGACCATCCTCCAGTTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGTGGAATGCCC 275
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| |||||||||||| || ||| ||||| ||| || | | || || ||||||
Sbjct 276 TCCTTGTCCTGAATCTTTGCTTTAACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAC 335
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || |||||||| | |||||| || ||||||||
Sbjct 336 GTTATGGTTTTACCCGTTAAAGTTTTAACGAAAATTTG 373
>seq39641
Length=587
Score = 98.7 bits (108), Expect = 2e-15
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549
|| |||||||| | ||||| || ||||| |||||||||| ||||| || ||| ||
Sbjct 326 CCAGCGAAGATCAATCGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGAT-TTTCGC 268
Query 199550 TT-CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAG 199608
|| ||| |||| || || | || |||||| ||||| |||||||| ||||| || ||
Sbjct 267 TTTCACATTCTCGATAGTATCAGATGCTTCTACTTCCAATGTGATCGTTTTACCAGTAAG 208
Query 199609 AGTTTTCACAAAAATTTG 199626
|||||| |||||||||||
Sbjct 207 AGTTTTTACAAAAATTTG 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178234748486624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |