Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq21486 95.1 1e-14 >seq21486 Length=1089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || ||||| ||||||||||||||||| || ||| ||| |||| Sbjct 377 AATGCAAATTTTCGTTAAAACTTTAACGGGTAAAACCATAACGTTGGAAGTGGAGGCTTC 318 Query 28613 AGAGACGGTGGCCGA-TCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | | | ||||||| | || ||||| ||||| | || ||||| Sbjct 317 GGATACCATCGAAAACGTTAAAGCAAAGATTC-AGGACAAGGAGGGCATTCCACCAGATC 259 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 ||||| || | |||||||| || |||||| |||| ||| | || || | || |||| Sbjct 258 AACAGCGATTGATCTTTGCCGGAAAACAACTGGAGGATGGTCGTACGCTGTCGGACTATA 199 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762 | || || || ||||| || || ||| |||| Sbjct 198 ATATCCAGAAGGAATCGACGCTTCACCTGGT 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425169044913888