Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq21486 95.1 1e-14
>seq21486
Length=1089
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || ||||| ||||||||||||||||| || ||| ||| ||||
Sbjct 377 AATGCAAATTTTCGTTAAAACTTTAACGGGTAAAACCATAACGTTGGAAGTGGAGGCTTC 318
Query 28613 AGAGACGGTGGCCGA-TCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|| || | | | | ||||||| | || ||||| ||||| | || |||||
Sbjct 317 GGATACCATCGAAAACGTTAAAGCAAAGATTC-AGGACAAGGAGGGCATTCCACCAGATC 259
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731
||||| || | |||||||| || |||||| |||| ||| | || || | || ||||
Sbjct 258 AACAGCGATTGATCTTTGCCGGAAAACAACTGGAGGATGGTCGTACGCTGTCGGACTATA 199
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762
| || || || ||||| || || ||| ||||
Sbjct 198 ATATCCAGAAGGAATCGACGCTTCACCTGGT 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425169044913888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |