Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq3 178 2e-39 seq4886 158 2e-33 seq21486 143 4e-29 seq13328 132 6e-26 seq5858 111 2e-19 seq9851 107 3e-18 seq27013 100 4e-16 >seq3 Length=46552 Score = 178 bits (196), Expect = 2e-39 Identities = 192/252 (76%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 ||||||| | || |||| |||| || |||| ||||||||||| || ||||| ||| Sbjct 27790 GTTGAATACAAGGGCGAGACGAAAACCTTCACTCCAGAAGAAATTTCATCAATGGTTTTG 27849 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||| |||||||| ||||| ||| | || | ||| | | || || ||||| || | Sbjct 27850 GTTAAAATGAAGGAAACTGCTGAAGCATTTCTTGGTCATGCGGTCAAGGATGCCGTCATC 27909 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| || |||| ||| ||||| ||||| || || || || | | ||| ||| Sbjct 27910 ACAGTCCCTGCGTATTTCAATGACTCACAGCGACAAGCAACGAAAGATTCCGGTGCAATT 27969 Query 195779 GCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || ||||| || |||||| |||||||||||||||||||||| || || ||||| ||||| Sbjct 27970 GCTGGTCTGAA-TGTCTTGCGAATTATCAATGAACCAACAGCAGCCGCTATTGCCTATGG 28028 Query 195838 TCTGGACAAGAA 195849 | |||||||||| Sbjct 28029 TTTGGACAAGAA 28040 Score = 141 bits (156), Expect = 1e-28 Identities = 185/256 (72%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 ||||||||||| ||||| || ||||| || || || || | ||||| ||||| |||||| Sbjct 28614 GAGATTGATTCTTTGTTCGAGGGAATCGATTTTTACACCAACATTACTCGTGCTCGTTTT 28673 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 ||||||||| |||||||||| | |||||| || ||||| ||| | | ||| Sbjct 28674 GAAGAGTTATGTGCTGATTTGTTCCGCTCAACTATGGATCCGGTTGAGAAAGCATTGCGT 28733 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 ||||| ||||||||||| || | ||| |||| ||||| | || || |||||||| ||| Sbjct 28734 GACGCGAAGATGGATAAAGCTCAAGTTCATGATATTGTATTAGTAGGTGGATCAACGCGT 28793 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 |||||||| | || | | || || |||||| | ||||| | || |||| Sbjct 28794 ATTCCGAAAGTACAGAAACTCCTATCAGATTTCTTCTCTGGCAAAGAACTGAATAAAAGC 28853 Query 196373 ATCAACCCGGATGAAG 196388 || || || ||||||| Sbjct 28854 ATTAATCCAGATGAAG 28869 Score = 109 bits (120), Expect = 7e-19 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 ||||||||||| ||||||||||| |||||||| || | | | |||||| | |||||| Sbjct 28157 ATCTTTGATCTTGGTGGTGGTACTTTTGATGTATCTATCTTGACTATTGAGGATGGTATT 28216 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTG 195977 ||||||||||| ||||||||||||| |||||||| || |||| Sbjct 28217 TTCGAAGTAAAATCTACTGCTGGTGACACTCATCTTGGAGGTG 28259 Score = 107 bits (118), Expect = 3e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAAC 196447 || || || |||||||| || || || || |||||||| || |||| | | | | Sbjct 29040 GCTGTGGCATATGGTGCTGCAGTGCAAGCAGCTATTCTTTCTGGTGATAAGTCGGAAGCC 29099 Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507 || ||||| | || |||| || || ||||| | || || ||| ||||||||||||| Sbjct 29100 GTACAAGACTTGTTGTTACTCGACGTCGCACCGCTTTCACTTGGTATTGAAACAGCGGGA 29159 Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTC 196567 ||||||||||| ||||| | ||||||| ||||| || || || | | ||| Sbjct 29160 GGTGTTATGACAGCTCTTATTAAGCGGAACACTACTATCCCAACGAAAACGTCTCAAACA 29219 Query 196568 TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 ||| | || || |||||||| || || ||||| | |||||| || Sbjct 29220 TTTACCACATACTCCGATAACCAGCCTGGTGTCCTTATTCAGGT 29263 Score = 104 bits (114), Expect = 3e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAAC 196447 || || ||||||||||| || || || || || ||| | ||||||| | | || Sbjct 23937 GCTGTAGCTTATGGTGCTGCAGTGCAAGCAGCAATTTTATCAGGTGATAAATCAGATGCT 23996 Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507 || |||||||| |||||| | ||||||||||| |||| |||||| | ||||| || ||| Sbjct 23997 GTACAAGATCTACTGCTATTAGATGTTGCACCATTATCACTGGGTATCGAAACTGCTGGT 24056 Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTC 196567 ||||| ||||| | || | || || ||||| || || || || | || Sbjct 24057 GGTGTGATGACCGCGTTGATAAAAAGAAATACAACCATCCCAACAAAAACATCGCAGACA 24116 Query 196568 TTTTCAACGTATTCCGATAATCAACCAGGTGT 196599 || | || |||||||||||||||||||| || Sbjct 24117 TTCACTACCTATTCCGATAATCAACCAGGAGT 24148 Score = 104 bits (114), Expect = 3e-17 Identities = 186/268 (69%), Gaps = 3/268 (1%) Strand=Plus/Plus Query 196599 TTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAG-GATAACCATCTACTTGGA 196657 ||||| |||| || || ||||| ||||| | | || ||| || ||| | || | || Sbjct 24254 TTCAT-TTCAGGTTTACGAAGGTGAACG-TGCGATGACAAGAGACAACAACCTGTTGGGC 24311 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | | || ||||| |||| || | ||||| ||||| || | || Sbjct 24312 AAATTCGAACTTTCTGGAATTCCGCCTGCTCCTCGTGGTGTGCCACAAATCGAAGTCACT 24371 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 || ||||| || ||||| || |||||||| ||| | || |||| || | ||||||| Sbjct 24372 TTTGATATCGATGCAAACGGTATTCTAAATGTCTCTGCACAGGATAAATCCACTGGCAAG 24431 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | |||||| ||||||||||| || || || | || ||||| ||||| ||| | Sbjct 24432 CACAATAAGATTACAATTACCAATGATAAAGGACGTTTGTCGAAGGATGAAATCGAAAGA 24491 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGG 196865 |||||| | || || |||||||||| || Sbjct 24492 ATGGTTGAGGAAGCCGAAAAGTACAAGG 24519 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 |||||||| || |||||||| ||||| || || |||||||| ||| || | | |||||| Sbjct 22968 AATGTATTAATTTTTGATCTTGGTGGAGGCACTTTTGATGTGTCAATTTTAACTATTGAG 23027 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGT 195976 | ||| || || |||||||| | || ||||| ||||||||||| || ||| Sbjct 23028 GATGGCATTTTTGAAGTAAAATCAACCGCTGGAGATACTCATCTTGGAGGT 23078 Score = 96.9 bits (106), Expect = 5e-15 Identities = 175/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 |||| |||||||| | || ||||| | ||||| || || | ||| ||||| || |||| Sbjct 23567 TTGAAATTGATTCACTCTTCGACGGTACCGACTTTTACACCAGTATCACCCGAGCCCGTT 23626 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 |||||||| | ||||||||||| | ||||| || ||||| ||| ||| | Sbjct 23627 TTGAAGAGCTTTGTGCTGATTTGTTTCGTTCAACCATGGATCCGGTTGAGAAAGCACTGC 23686 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 |||| || || |||||||| || | | |||| ||||| | || || || || || | Sbjct 23687 GTGATGCTAAAATGGATAAAGCTCAAATGCATGATATTGTTTTGGTTGGCGGTTCTACTC 23746 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370 ||||||| || | ||| | |||| || || || | ||||| | ||||||| Sbjct 23747 GTATTCCAAAAGTGCAAAAATTGCTCTCCGATTTTTTTTCTGGAAAAGAACTGAACAAAA 23806 Query 196371 CGATCAACCCGGATGA 196386 || || || ||||| Sbjct 23807 GTATTAATCCAGATGA 23822 >seq4886 Length=3728 Score = 158 bits (174), Expect = 2e-33 Identities = 176/234 (75%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 195616 GAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGAC 195675 ||| |||| || ||||| ||||||||||| | ||||| | ||| ||||| || | Sbjct 2419 GAAAAAACC-TTCGCTCCTGAAGAAATTTCAGCGATGGTTCTCGGTAAAATGAAAGAAAT 2361 Query 195676 TGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTT 195735 ||||||| | | | || ||| |||||| |||||||||| || |||||||||||||| Sbjct 2360 TGCGGAAGCATATCTTGGAAAAGAAGTGAAACATGCAGTTGTCACAGTACCTGCTTACTT 2301 Query 195736 CAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCT 195795 | |||| ||||||| || || || || || || | | ||||||| || || || | | Sbjct 2300 TAATGATGCACAACGCCAAGCCACTAAAGATGCAGGTACTATTGCCGGCCTCAATGTTGT 2241 Query 195796 TAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 | || ||||||||||||||||| || || ||||||||||| ||||| ||||| Sbjct 2240 CCGTATCATCAATGAACCAACAGCTGCCGCTATTGCTTATGGGCTGGATAAGAA 2187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/199 (72%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGG--AACTTTCGAT 196666 || |||||||||||||| || || |||| |||||||| | ||||| || ||| ||| Sbjct 729 GTTTATGAAGGAGAACGG-CCAATGACAAAAGATAACCACAT-CTTGGGCAAGTTT-GAT 673 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 |||||||| || ||| | ||||| ||||||| || || || | ||| || || || Sbjct 672 TTGACGGGTATCCCACCAGCACCACGAGGTGTACCGCAAATCGAGGTTACTTTTGAAATC 613 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA-AA 196785 || | ||||| ||||| |||| ||||| ||||| || | | | || |||| || || Sbjct 612 GATGTGAATGGCATTCTGCACGTAACAGCAGAGGATAAAGGTACAGG-AAATAAAAATAA 554 Query 196786 GATTGTGATTACCAATGAC 196804 ||| ||| || |||||| Sbjct 553 AATTACGATCACAAATGAC 535 >seq21486 Length=1089 Score = 143 bits (158), Expect = 4e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| | || || ||||| || || | || || ||| | || Sbjct 376 ATGCAAATTTTCGTTAAAACTTTAACGGGTAAAACCATAACGTTGGAAGTGGAGGCTTCG 317 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | ||||| |||||||| || ||||| ||||||||||| ||||| Sbjct 316 GATACCATCGAAAACGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAA 257 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || ||||| || ||||| || || ||||| ||||| || | || || || Sbjct 256 CAGCGATTGATCTTTGCCGGAAAACAACTGGAGGATGGTCGTACGCTGTCGGACTATAAT 197 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || ||||| ||||| | ||||| || || Sbjct 196 ATCCAGAAGGAATCGACGCTTCACCTGGTTCTTCGTCTTCGCGGCGG 150 Score = 134 bits (148), Expect = 2e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| ||||| | || || ||||| ||||| || || ||||| Sbjct 1044 GTGGTATGCAAATCTTTGTAAAAACGTTGACAGGCAAAACAATCACTCTAGAAGTTGAAG 985 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || |||||||| || | || |||||||||||||| || ||||| ||||| || | Sbjct 984 CCTCTGATACAATCGAAAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCGCCAG 925 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTA 172003 ||||||| || |||||||| ||||||| Sbjct 924 ATCAGCAGCGTCTTATTTTCGCTGGTA 898 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || || |||||||| ||||| || || || || || || | || Sbjct 723 ATGCAGATTTTCGTAAAGACGCTTACTGGCAAAACCATAACGCTGGAAGTAGAAGCTTCG 664 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || | |||||||| ||||| ||||| || ||||| || || |||||| Sbjct 663 GATACGATCGAGAATGTGAAAGCCAAAATTCAGGATAAAGAGGGCATCCCTCCTGATCAG 604 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || ||||||||||| ||| Sbjct 603 CAGCGTCTTATTTTTGCAGGT 583 >seq13328 Length=1679 Score = 132 bits (146), Expect = 6e-26 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || |||||||| | ||||| || || || ||||| ||||| || ||||| Sbjct 47 ATGCAAATATTCGTGAAAACATTGACTGGTAAGACGATTACCCTTGAGGTAGAATCGTCT 106 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||| ||||||||||| || ||||| |||||| Sbjct 107 GATACCATTGAGAATGTGAAGGCTAAAATTCAGGATAAGGAAGGTATCCCACCTGATCAG 166 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 ||||||||||||||||| ||||| Sbjct 167 CAACGACTTATTTTTGCAGGTAA 189 >seq5858 Length=3261 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| | | || ||||| ||||| | || ||||| | || Sbjct 2824 ATGCAAATTTTTGTAAAAACGTTGAAGGGCAAAACAATCACTTTAGAAGTTGAAACTTCT 2883 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || |||||||| | | || | || ||||||||| || ||||| |||||| |||||| Sbjct 2884 GATACAATCGAAATTGTAAAGGACAGGATTCAAGAAAAAGAAGGAATTCCATTAGATCAG 2943 Query 171982 CAACGACTTATTTTTGCTGGTAAACA 172007 ||||| |||||||||| ||||||||| Sbjct 2944 CAACGTCTTATTTTTGATGGTAAACA 2969 Score = 100 bits (110), Expect = 4e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACT-GGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||||| || |||| | || || || |||| || | || || || ||| ||| Sbjct 2416 TATGCAAATCTTCGT-AAAAACATTGCTAGGGAAAAAGATTATTCTTGAAGTGGAGGCGT 2474 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||||| || || || | ||||| || || || |||||||| || ||| |||| |||| Sbjct 2475 CAGACACGATTGAGAATGTTAAAGCAAAAATACAGGATAAGGAGGGTATTTCACCGGATC 2534 Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003 |||| || | ||||||||||||| Sbjct 2535 AGCAGCGCTTGATTTTTGCTGGTA 2558 >seq9851 Length=2160 Score = 107 bits (118), Expect = 3e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| ||||| |||||||| ||||| ||||| |||| || || Sbjct 1477 GTGGTATGCAAATCTTTGTAAAAACTCTTACTGGTAAAACGATCACATTCGAAGTAGAAG 1418 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || ||||| || | || || || || || || || || || |||||||| | Sbjct 1417 CATCTGATACCATCGAGAATGTTAAGGCGAAAATCCAGGACAAAGAGGGAATTCCACCAG 1358 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTA 172003 |||| || ||| | || || ||||||| Sbjct 1357 ATCAACAGCGATTGATCTTCGCTGGTA 1331 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGA-AAAACTATCACCCTCGAGGTTGAG 171915 || ||||| |||| |||| |||| || ||| ||||| |||| | | | ||| Sbjct 1089 GTGGTATGAAAATTTTTGCAAAAAAA-TTGGAGGACAAAACAGTCACTTTAAAAGCTGAA 1031 Query 171916 TCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCC 171975 | || || | |||||| || | || |||||||||||||| || ||||| ||||| || Sbjct 1030 GCCTCTGATAAAATCGAAAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCGCCA 971 Query 171976 GATCAGCAACGACTTATTTTTGCTGGTA 172003 |||||||| || |||||||| ||||||| Sbjct 970 GATCAGCAGCGTCTTATTTTCGCTGGTA 943 >seq27013 Length=870 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||||||||| || || || | ||||||| ||| |||| ||| || || || |||| Sbjct 240 TATGCAAATCTTCGTAAAGACATTGACTGGAAGAACAATCATCCTTGAAGTGGAAGCGTC 181 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 |||||| | || || | ||||| ||||| || |||||||| || ||| | || || || Sbjct 180 AGACACGGTTGAGAATGTTAAAGCGAAGATACAGGATAAGGAGGGTATTTCGCCGGAACA 121 Query 171981 GCAACGACTTATTTTTGCTGGTA 172003 || || || |||||||||||| Sbjct 120 ACAGCGCCTAGTTTTTGCTGGTA 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657488471011840