Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq29614 84.2 4e-11 seq26593 84.2 4e-11 >seq29614 Length=797 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 738 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 794 >seq26593 Length=883 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 60 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825447348890880