Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq21486 95.1 1e-14 >seq21486 Length=1089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || || | || || || | || ||||| || || || ||||| Sbjct 186 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCCTCCAGTTGTTTTCCGGCAAAG 245 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| || || | |||| || |||||||||| |||||| |||| | ||| Sbjct 246 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTT-GCTTTAACGTT 304 Query 35666 GCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || | ||||| |||| ||| || ||||||||||| |||||||| || Sbjct 305 TTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTAAC 364 Query 35725 AAATATCTGCATTC 35738 || || ||||||| Sbjct 365 GAAAATTTGCATTC 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450537368917760