Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq21486 95.1 1e-14
>seq21486
Length=1089
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || || || || || | || || || | || ||||| || || || |||||
Sbjct 186 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCCTCCAGTTGTTTTCCGGCAAAG 245
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||| || || | |||| || |||||||||| |||||| |||| | |||
Sbjct 246 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTT-GCTTTAACGTT 304
Query 35666 GCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | || || | ||||| |||| ||| || ||||||||||| |||||||| ||
Sbjct 305 TTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTAAC 364
Query 35725 AAATATCTGCATTC 35738
|| || |||||||
Sbjct 365 GAAAATTTGCATTC 378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450537368917760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |