Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 163 9e-35 seq4886 149 2e-30 seq26370 132 1e-25 seq21486 132 1e-25 seq13328 127 6e-24 seq2700 123 8e-23 seq39641 122 3e-22 seq9851 109 2e-18 seq5858 105 2e-17 seq471 98.7 3e-15 seq13 91.5 4e-13 >seq3 Length=46552 Score = 163 bits (180), Expect = 9e-35 Identities = 251/354 (71%), Gaps = 8/354 (2%) Strand=Plus/Plus Query 349388 GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAA 349447 ||||| || ||| | |||||| | | ||| ||| ||| |||||| ||| | ||| Sbjct 27679 GATGCGAAACGATTGATTGGTCGTAAATTTGATGATGGATCAGTACAATCAGATATGAAA 27738 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA---TAAACCAATTATTGAGGTTGAA 349504 |||| || || | ||| | ||| | |||| |||||||| | |||||||| Sbjct 27739 CATTGGCCATTCAAAGTTAT---AAATGCTGGTGGCGGTAAACCAAAAGTGCAGGTTGAA 27795 Query 349505 TATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563 || || || || || ||||| | | || ||||||||||||||||||||||| ||||| Sbjct 27796 TACAAGGGCGAGACGAAAACCTTCACT-CCAGAAGAAATTTCATCAATGGTTTTGGTTAA 27854 Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 ||||||||||| ||||||||||| | | ||| | | || | ||||| || || || || Sbjct 27855 AATGAAGGAAACTGCTGAAGCATTTCTTGGTCATGCGGTCAAGGATGCCGTCATCACAGT 27914 Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683 || || ||||| ||||| | ||||| ||||| |||||| | || ||||| || Sbjct 27915 CCCTGCGTATTTCAATGACTCACAGCGACAAGCAACGAAAGATTCCGGTGCAATTGCTGG 27974 Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 | ||||| | |||| || |||||||| || || || || ||||| ||||| Sbjct 27975 TCTGAATGTCTTGCGAATTATCAATGAACCAACAGCAGCCGCTATTGCCTATGG 28028 Score = 120 bits (132), Expect = 9e-22 Identities = 183/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC--TATTACACGTGCTC 350087 |||||||||||||| || || || | || || || || | ||| || || || | Sbjct 23566 ATTGAAATTGATTCACTCTTCGACGGTACCGACTT--TTACACCAGTATCACCCGAGCCC 23623 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | |||||||| | ||| ||| | ||| | |||| |||||||| || || |||| | Sbjct 23624 GTTTTGAAGAGCTTTGTGCTGATTTGTTTCGTTCAACCATGGATCCGGTTGAGAAAGCAC 23683 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 | ||||| |||||| ||| ||| || |||| | ||||| ||||| ||||||| Sbjct 23684 TGCGTGATGCTAAAATGGATAAAGCTCAAATGCATGATATTGTTTTGGTTGGCGGTTCTA 23743 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267 | |||||||||||||| ||| | || || || || |||||| ||| ||||||| | Sbjct 23744 CTCGTATTCCAAAAGTGCAAAAATTGCTCTCCGATTTTTTTTCTGGAAAAGAACTGAACA 23803 Query 350268 GATCAATTAATCCAGATGA 350286 | |||||||||||||| Sbjct 23804 AAAGTATTAATCCAGATGA 23822 Score = 114 bits (126), Expect = 4e-20 Identities = 186/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 350029 TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTA--TTACACGTGC 350085 ||| || ||||||||| ||| | || || | ||||| || || | | |||| ||||| Sbjct 28610 TATCGAGATTGATTCT-TTGTTCGAGGGAATCGATTT--TTACACCAACATTACTCGTGC 28666 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 ||| |||||||| |||||| ||| | || | |||| |||||||| || || |||| Sbjct 28667 TCGTTTTGAAGAGTTATGTGCTGATTTGTTCCGCTCAACTATGGATCCGGTTGAGAAAGC 28726 Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 ||| || || || ||| ||| ||| || |||| | || ||||| ||||| || Sbjct 28727 ATTGCGTGACGCGAAGATGGATAAAGCTCAAGTTCATGATATTGTATTAGTAGGTGGATC 28786 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTC 350265 || |||||||| ||||| || | | ||||| || || || ||||||||||| Sbjct 28787 AACGCGTATTCCGAAAGTACAGAAACTCCTATCAGATTTCTTCTCTGGCAAAGAACTGAA 28846 Query 350266 TAGATCAATTAATCCAGATGAAG 350288 || | |||||||||||||||| Sbjct 28847 TAAAAGCATTAATCCAGATGAAG 28869 Score = 104 bits (114), Expect = 7e-17 Identities = 216/320 (68%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 182747 ATATCCTTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGC 182806 |||| ||| ||| ||||||||| |||||| |||| | | ||||| ||| Sbjct 29671 ATATGATTCCAGAGCATTTTTAGCTGCAATACGATCTTTCTGTGCTTCATCATCTGCCTT 29612 Query 182807 ATACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATC 182866 || || ||||| ||| | ||| | ||| || ||||| || || | | | ||| ||| Sbjct 29611 GTATTTCTCAGCTTCCTGTACCATCCGTTCAATCTCATCCTTTGACAAACGTCCTTTATC 29552 Query 182867 ATTTGTAAT--TACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTT 182924 || ||||| || | | || || ||| |||||||| || ||||| |||||| Sbjct 29551 GTTGGTAATCGTAATCTTGTTCTGTTT--TCCTGTTGATTTATCTTGTGCGGAAACATTC 29494 Query 182925 AAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATT 182984 ||||| || || | ||||| |||||| | |||||||| || || ||||| || || Sbjct 29493 AAAATTCCGTTCGCGTCAATATCAAAAGTAACTTCAATTTGCGGCACACCACGAGGAGCA 29434 Query 182985 GGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTC 183044 ||||||||||||| || |||| ||| | |||||| ||||| || | || | Sbjct 29433 GGTGGAATTCCAGACAACTCGAATTTACCAAGCAGATTATTGTCTTTCGTCATAGCACGT 29374 Query 183045 TCGCCTTCATATACTTGAAT 183064 || ||||| || || | ||| Sbjct 29373 TCACCTTCGTAAACCTAAAT 29354 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 ||||| |||||| | ||||||||||||||||||||||| | | || |||| || || Sbjct 28154 CTTATCTTTGATCTTGGTGGTGGTACTTTTGATGTATCTATCTTGACTATTGAGGATGGT 28213 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 ||||| ||||| ||| | ||||||||||| || |||||||| || Sbjct 28214 ATTTTCGAAGTAAAATCTACTGCTGGTGACACTCATCTTGGAGG 28257 Score = 96.9 bits (106), Expect = 1e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 ||||||||| | ||||| || ||||||||||| ||| | |||| |||| || || ||| Sbjct 22977 ATTTTTGATCTTGGTGGAGGCACTTTTGATGTGTCAATTTTAACTATTGAGGATGGCATT 23036 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 |||||||| ||| |||| ||||| ||||| |||||||| || Sbjct 23037 TTTGAAGTAAAATCAACCGCTGGAGATACTCATCTTGGAGG 23077 Score = 95.1 bits (104), Expect = 4e-14 Identities = 145/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 349388 GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAA 349447 ||||| || ||||| || ||||||| ||| ||| | | ||| || ||| | || Sbjct 22129 GATGCAAAACGACTGATCGGTAGAAAATTTGATGATCCAGCGGTACAGTCAGATATGAAG 22188 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAA--GACGGTGATAAACCAATTATTGAGGTTGAAT 349505 |||| || || | ||| | ||| || |||| ||||| | || | || || | Sbjct 22189 CATTGGCCCTTCAAAGTTAT--CAATGCTGATGGTGGCAAACCGAAGGTTCAAGTAGAGT 22246 Query 349506 ATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAA 349564 ||||||||| ||||||||| ||| ||| |||||||| ||||| |||||||| | ||| Sbjct 22247 ATAAAGGTGAAACAAAAAC-ATTCACACCAGAAGAAATATCATCTATGGTTTTGGGAAAA 22305 Query 349565 ATGAAGGAAATTGCTGAAGCAT 349586 |||||||||| |||||||||| Sbjct 22306 ATGAAGGAAACAGCTGAAGCAT 22327 Score = 95.1 bits (104), Expect = 4e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 ||||||| |||||||||||||||| || ||||||||||| ||||| || | |||||||| Sbjct 27317 AGGTAACCGAACAACGCCATCATATGTGGCATTTACCGACACTGAACGCCTTATTGGTGA 27376 Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388 | | || |||||||| | ||| || || | ||||| ||||||| Sbjct 27377 TGCAGCTAAAAATCAGGTTGCAATGAACCCGCACAATACTGTTTTTG 27423 Score = 91.5 bits (100), Expect = 4e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 183691 CACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATAT 183750 |||| || | ||| || || |||||||||| ||| ||||| || || || || |||||| Sbjct 28259 CACCTCCAAGATGAGTGTCACCAGCAGTAGATTTTACTTCGAAAATACCATCCTCAATAG 28200 Query 183751 TTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | || || ||||||||||| ||||||||||| | |||||| Sbjct 28199 TCAAGATAGATACATCAAAAGTACCACCACCAAGATCAAA 28160 Score = 87.8 bits (96), Expect = 5e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562 |||| | || | ||||||||||||||| || ||||| |||||| ||||| |||| Sbjct 29353 AATTTAGGTTTACGAAGGTGAACGTGCTATGACGAAAGACAATAATCTGCTTGGTAAATT 29412 Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 | || ||||||||| ||| | || || || || |||||||| |||| || Sbjct 29413 CGAGTTGTCTGGAATTCCACCTGCTCCTCGTGGTGTGCCGCAAATTGAAGTTACTTTTGA 29472 Query 350623 TATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAG 350682 |||||| | || || ||||| |||||| ||||| || ||||||| || ||| | Sbjct 29473 TATTGACGCGAACGGAATTTTGAATGTTTCCGCACAAGATAAATCAACAGGAAAACAGAA 29532 Query 350683 TAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGA 350733 ||| | ||||| || |||||| | | ||||| || || ||||| Sbjct 29533 CAAGATTACGATTACCAACGATAAAGGACGTTTGTCAAAGGATGAGATTGA 29583 >seq4886 Length=3728 Score = 149 bits (164), Expect = 2e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||||||||| | |||||| | | ||||||||| |||||||| ||||||||| | Sbjct 2404 CCTGAAGAAATTTCAGCGATGGTTCTCGGTAAAATGAAAGAAATTGCGGAAGCATATCTT 2345 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || ||| | |||| ||| | || ||||| || || ||||||||||| || || Sbjct 2344 GGAAAAGAAGTGAAACATGCAGTTGTCACAGTACCTGCTTACTTTAATGATGCACAACGC 2285 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || |||||||| || | ||||| || | |||||| | | || || |||||| Sbjct 2284 CAAGCCACTAAAGATGCAGGTACTATTGCCGGCCTCAATGTTGTCCGTATCATCAATGAA 2225 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 || || ||||| || ||||| |||||||| ||||| Sbjct 2224 CCAACAGCTGCCGCTATTGCTTATGGGCTGGATAA 2190 Score = 91.5 bits (100), Expect = 4e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 349766 AATATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||||||||| |||||||| | || ||||| ||||||||||| || || | || |||| Sbjct 1929 AATATTCTTGTTTTTGATCTTGGCGGTGGAACTTTTGATGTGTCGATATTGACGATTGAT 1870 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 | || |||| ||||| ||| || ||||||||| || | ||||| ||||||||| Sbjct 1869 AATGGTGTTTTCGAAGTATTAGCTACCAATGGTGATACTCACTTGGGTGGTGAAGATTTT 1810 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 || | || | | ||||||| |||||| ||| || Sbjct 1809 GACCAGCGAGTTATGGAGCATTTTATTAAAGTATTCAA 1772 >seq26370 Length=891 Score = 132 bits (146), Expect = 1e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799 ||||||| ||| |||||||| ||||| || |||||||| ||||||| ||| || ||| | Sbjct 647 CCTCCAATCATCACAAAATCTGCTCCAGCACCAAATGCCTTCGCAACATCGCCAGGATTT 706 Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859 | || || ||||| |||||||| ||||| || ||||||| ||||| ||||| ||| Sbjct 707 GTGCATCCTCCATCGCTCATAACATGCCCATTCAAACCATGTGAAGCATCGGCACATTCT 766 Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAAC 130915 | | |||| ||||||||||| |||||||| | | ||| | || |||||||| Sbjct 767 AACACAGCACTCAGTTGTGGATAACCAACTCCCGCTTTTTTCCGGGTCGTACAAAC 822 >seq21486 Length=1089 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || ||||| || || || || || |||||||| || || | || || ||||| Sbjct 165 AGAACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCC 224 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||||||||| |||||||| | || || ||||| || ||||| || || || ||| Sbjct 225 TCCAGTTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTCC 284 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || ||||| || || || || | ||| || | || ||||| | || | || Sbjct 285 TGAATCTTTGCTTTAACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTT 344 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || |||| ||||| || ||||| |||||| Sbjct 345 TTACCCGTTAAAGTTTTAACGAAAATTTGCATT 377 Score = 127 bits (140), Expect = 6e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || ||||| |||||||||||||| || || ||||||||||||||||| ||| Sbjct 584 CCTGCAAAAATAAGACGCTGCTGATCAGGAGGGATGCCCTCTTTATCCTGAATTTTGGCT 643 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || |||| ||| || | ||| ||||| || || | || || || || || Sbjct 644 TTCACATTCTCGATCGTATCCGAAGCTTCTACTTCCAGCGTTATGGTTTTGCCAGTAAGC 703 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || ||||| ||||||||||| Sbjct 704 GTCTTTACGAAAATCTGCAT 723 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| || || ||||| |||||||| || |||||||||||||| || ||||| || || Sbjct 900 CCAGCGAAAATAAGACGCTGCTGATCTGGCGGAATTCCTTCTTTGTCTTGAATCTTGGCC 959 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || || | |||||| | ||||||||| || || | ||| || || || | Sbjct 960 TTTACATTTTCGATTGTATCAGAGGCTTCAACTTCTAGAGTGATTGTTTTGCCTGTCAAC 1019 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||||||||| || ||||| Sbjct 1020 GTTTTTACAAAGATTTGCAT 1039 >seq13328 Length=1679 Score = 127 bits (140), Expect = 6e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || ||||| || || |||||||||||||| || || ||||| ||||||||||||||| Sbjct 189 TTACCTGCAAAAATAAGTCGTTGCTGATCAGGTGGGATACCTTCCTTATCCTGAATTTTA 130 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | |||||| | ||| || ||||| |||| ||||| || || Sbjct 129 GCCTTCACATTCTCAATGGTATCAGACGATTCTACCTCAAGGGTAATCGTCTTACCAGTC 70 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | |||||| || || || ||||| Sbjct 69 AATGTTTTCACGAATATTTGCAT 47 >seq2700 Length=5623 Score = 123 bits (136), Expect = 8e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || ||||| || | || |||||||| ||||| || |||||||| |||||||| || Sbjct 544 TTACCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTC 603 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||||||||| ||||||| ||| || | ||| || |||||||| | ||||| || ||| Sbjct 604 GCTTTTACATTTTCAATCGTATCCGAGGATTCGACCTCAAGTGTGATCGTCTTACCAGTT 663 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| ||||| ||||| Sbjct 664 AAAGTCTTTACGAAAATTTGCAT 686 >seq39641 Length=587 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| ||||| | || || ||||| || |||||||||||||| ||||| ||||| ||| Sbjct 326 CCAGCGAAGATCAATCGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTCGCT 267 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | |||||||| ||| ||||| | ||| | || || || || || Sbjct 266 TTCACATTCTCGATAGTATCAGATGCTTCTACTTCCAATGTGATCGTTTTACCAGTAAGA 207 Query 140718 GTTTTTACAAAAATCTGCAT 140737 |||||||||||||| ||||| Sbjct 206 GTTTTTACAAAAATTTGCAT 187 >seq9851 Length=2160 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| ||||| | || || ||||| || |||||||| ||||| ||||| ||||| || Sbjct 1333 CCAGCGAAGATCAATCGCTGTTGATCTGGTGGAATTCCCTCTTTGTCCTGGATTTTCGCC 1392 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | |||||||| ||| ||||| | ||| | || || || || || Sbjct 1393 TTAACATTCTCGATGGTATCAGATGCTTCTACTTCGAATGTGATCGTTTTACCAGTAAGA 1452 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||||||||| || ||||| Sbjct 1453 GTTTTTACAAAGATTTGCAT 1472 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| || || ||||| |||||||| || |||||||||||||| || ||||| || || Sbjct 945 CCAGCGAAAATAAGACGCTGCTGATCTGGCGGAATTCCTTCTTTGTCTTGAATCTTGGCC 1004 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || || |||||| | |||| ||| | || ||||| || | | | Sbjct 1005 TTTACATTTTCGATTTTATCAGAGGCTTCAGCTTTTAAAGTGACTGTTTTGTCCTCCAAT 1064 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| ||||||| | ||| Sbjct 1065 TTTTTTGCAAAAATTTTCAT 1084 >seq5858 Length=3261 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 ||||| ||| |||| || |||||||||||||| |||||||||||||| || ||||| Sbjct 2969 TGTTTACCATCAAAAATAAGACGTTGCTGATCTAATGGAATTCCTTCTTTTTCTTGAATC 2910 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 | | |||||| | || || | |||||| | ||||||||| | || | ||| || || Sbjct 2909 CTGTCCTTTACAATTTCGATTGTATCAGAAGTTTCAACTTCTAAAGTGATTGTTTTGCCC 2850 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 | | |||||||||||||| ||||| Sbjct 2849 TTCAACGTTTTTACAAAAATTTGCAT 2824 >seq471 Length=13412 Score = 98.7 bits (108), Expect = 3e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228 |||| ||||| |||||| || ||||||| | ||| | ||||| || || || || Sbjct 1415 TTTCGCACAGTACCATCATAACTGACCATTACACTTTCCATAGCTTTGATCAGCCGGCGT 1474 Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288 ||| || ||||||| ||||| || |||||||| || | ||| |||| |||||| Sbjct 1475 TGAATGTAGCCAGTTTCTGCTGTTTTTACAGCAGTATCGATAAGACCTTCACGGCCACCC 1534 Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348 |||||||| ||||| ||||| | ||||| || || | | | ||||| | || | ||| Sbjct 1535 ATTGCATGAAAGAAGAATTCGGACGGAGTCAGCCCTGCTAGATATGAATTTTCGACAAAA 1594 Query 378349 CCTCTTG 378355 ||| ||| Sbjct 1595 CCTTTTG 1601 >seq13 Length=34373 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836 ||||||| || | ||| || ||| | | | ||||||| ||||||| ||||| || | Sbjct 23126 ATCCACCGGCACAGTGTAGTGCAGGACCAGTTGGTGATGATCTTTTTCACTGGCAGGCTA 23067 Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896 | || ||||| ||| ||| | || |||||||||||| | ||| | | ||| ||| Sbjct 23066 CTATAATGGGTCCACCAGAATCACCATATCAAGGTGGTGTGTTTTTCCTGACCATTCATT 23007 Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTA 54931 |||| ||||||||||||||||| ||||| ||| Sbjct 23006 TTCCGACGGATTATCCATTTAAACCACCAAAGGTA 22972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514371597634016