Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 9e-35
seq4886 149 2e-30
seq26370 132 1e-25
seq21486 132 1e-25
seq13328 127 6e-24
seq2700 123 8e-23
seq39641 122 3e-22
seq9851 109 2e-18
seq5858 105 2e-17
seq471 98.7 3e-15
seq13 91.5 4e-13
>seq3
Length=46552
Score = 163 bits (180), Expect = 9e-35
Identities = 251/354 (71%), Gaps = 8/354 (2%)
Strand=Plus/Plus
Query 349388 GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAA 349447
||||| || ||| | |||||| | | ||| ||| ||| |||||| ||| | |||
Sbjct 27679 GATGCGAAACGATTGATTGGTCGTAAATTTGATGATGGATCAGTACAATCAGATATGAAA 27738
Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA---TAAACCAATTATTGAGGTTGAA 349504
|||| || || | ||| | ||| | |||| |||||||| | ||||||||
Sbjct 27739 CATTGGCCATTCAAAGTTAT---AAATGCTGGTGGCGGTAAACCAAAAGTGCAGGTTGAA 27795
Query 349505 TATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563
|| || || || || ||||| | | || ||||||||||||||||||||||| |||||
Sbjct 27796 TACAAGGGCGAGACGAAAACCTTCACT-CCAGAAGAAATTTCATCAATGGTTTTGGTTAA 27854
Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623
||||||||||| ||||||||||| | | ||| | | || | ||||| || || || ||
Sbjct 27855 AATGAAGGAAACTGCTGAAGCATTTCTTGGTCATGCGGTCAAGGATGCCGTCATCACAGT 27914
Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683
|| || ||||| ||||| | ||||| ||||| |||||| | || ||||| ||
Sbjct 27915 CCCTGCGTATTTCAATGACTCACAGCGACAAGCAACGAAAGATTCCGGTGCAATTGCTGG 27974
Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737
| ||||| | |||| || |||||||| || || || || ||||| |||||
Sbjct 27975 TCTGAATGTCTTGCGAATTATCAATGAACCAACAGCAGCCGCTATTGCCTATGG 28028
Score = 120 bits (132), Expect = 9e-22
Identities = 183/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC--TATTACACGTGCTC 350087
|||||||||||||| || || || | || || || || | ||| || || || |
Sbjct 23566 ATTGAAATTGATTCACTCTTCGACGGTACCGACTT--TTACACCAGTATCACCCGAGCCC 23623
Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147
| |||||||| | ||| ||| | ||| | |||| |||||||| || || |||| |
Sbjct 23624 GTTTTGAAGAGCTTTGTGCTGATTTGTTTCGTTCAACCATGGATCCGGTTGAGAAAGCAC 23683
Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207
| ||||| |||||| ||| ||| || |||| | ||||| ||||| |||||||
Sbjct 23684 TGCGTGATGCTAAAATGGATAAAGCTCAAATGCATGATATTGTTTTGGTTGGCGGTTCTA 23743
Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267
| |||||||||||||| ||| | || || || || |||||| ||| ||||||| |
Sbjct 23744 CTCGTATTCCAAAAGTGCAAAAATTGCTCTCCGATTTTTTTTCTGGAAAAGAACTGAACA 23803
Query 350268 GATCAATTAATCCAGATGA 350286
| ||||||||||||||
Sbjct 23804 AAAGTATTAATCCAGATGA 23822
Score = 114 bits (126), Expect = 4e-20
Identities = 186/263 (71%), Gaps = 6/263 (2%)
Strand=Plus/Plus
Query 350029 TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTA--TTACACGTGC 350085
||| || ||||||||| ||| | || || | ||||| || || | | |||| |||||
Sbjct 28610 TATCGAGATTGATTCT-TTGTTCGAGGGAATCGATTT--TTACACCAACATTACTCGTGC 28666
Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145
||| |||||||| |||||| ||| | || | |||| |||||||| || || ||||
Sbjct 28667 TCGTTTTGAAGAGTTATGTGCTGATTTGTTCCGCTCAACTATGGATCCGGTTGAGAAAGC 28726
Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205
||| || || || ||| ||| ||| || |||| | || ||||| ||||| ||
Sbjct 28727 ATTGCGTGACGCGAAGATGGATAAAGCTCAAGTTCATGATATTGTATTAGTAGGTGGATC 28786
Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTC 350265
|| |||||||| ||||| || | | ||||| || || || |||||||||||
Sbjct 28787 AACGCGTATTCCGAAAGTACAGAAACTCCTATCAGATTTCTTCTCTGGCAAAGAACTGAA 28846
Query 350266 TAGATCAATTAATCCAGATGAAG 350288
|| | ||||||||||||||||
Sbjct 28847 TAAAAGCATTAATCCAGATGAAG 28869
Score = 104 bits (114), Expect = 7e-17
Identities = 216/320 (68%), Gaps = 4/320 (1%)
Strand=Plus/Minus
Query 182747 ATATCCTTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGC 182806
|||| ||| ||| ||||||||| |||||| |||| | | ||||| |||
Sbjct 29671 ATATGATTCCAGAGCATTTTTAGCTGCAATACGATCTTTCTGTGCTTCATCATCTGCCTT 29612
Query 182807 ATACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATC 182866
|| || ||||| ||| | ||| | ||| || ||||| || || | | | ||| |||
Sbjct 29611 GTATTTCTCAGCTTCCTGTACCATCCGTTCAATCTCATCCTTTGACAAACGTCCTTTATC 29552
Query 182867 ATTTGTAAT--TACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTT 182924
|| ||||| || | | || || ||| |||||||| || ||||| ||||||
Sbjct 29551 GTTGGTAATCGTAATCTTGTTCTGTTT--TCCTGTTGATTTATCTTGTGCGGAAACATTC 29494
Query 182925 AAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATT 182984
||||| || || | ||||| |||||| | |||||||| || || ||||| || ||
Sbjct 29493 AAAATTCCGTTCGCGTCAATATCAAAAGTAACTTCAATTTGCGGCACACCACGAGGAGCA 29434
Query 182985 GGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTC 183044
||||||||||||| || |||| ||| | |||||| ||||| || | || |
Sbjct 29433 GGTGGAATTCCAGACAACTCGAATTTACCAAGCAGATTATTGTCTTTCGTCATAGCACGT 29374
Query 183045 TCGCCTTCATATACTTGAAT 183064
|| ||||| || || | |||
Sbjct 29373 TCACCTTCGTAAACCTAAAT 29354
Score = 98.7 bits (108), Expect = 3e-15
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
||||| |||||| | ||||||||||||||||||||||| | | || |||| || ||
Sbjct 28154 CTTATCTTTGATCTTGGTGGTGGTACTTTTGATGTATCTATCTTGACTATTGAGGATGGT 28213
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875
||||| ||||| ||| | ||||||||||| || |||||||| ||
Sbjct 28214 ATTTTCGAAGTAAAATCTACTGCTGGTGACACTCATCTTGGAGG 28257
Score = 96.9 bits (106), Expect = 1e-14
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
||||||||| | ||||| || ||||||||||| ||| | |||| |||| || || |||
Sbjct 22977 ATTTTTGATCTTGGTGGAGGCACTTTTGATGTGTCAATTTTAACTATTGAGGATGGCATT 23036
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875
|||||||| ||| |||| ||||| ||||| |||||||| ||
Sbjct 23037 TTTGAAGTAAAATCAACCGCTGGAGATACTCATCTTGGAGG 23077
Score = 95.1 bits (104), Expect = 4e-14
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Plus
Query 349388 GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAA 349447
||||| || ||||| || ||||||| ||| ||| | | ||| || ||| | ||
Sbjct 22129 GATGCAAAACGACTGATCGGTAGAAAATTTGATGATCCAGCGGTACAGTCAGATATGAAG 22188
Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAA--GACGGTGATAAACCAATTATTGAGGTTGAAT 349505
|||| || || | ||| | ||| || |||| ||||| | || | || || |
Sbjct 22189 CATTGGCCCTTCAAAGTTAT--CAATGCTGATGGTGGCAAACCGAAGGTTCAAGTAGAGT 22246
Query 349506 ATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAA 349564
||||||||| ||||||||| ||| ||| |||||||| ||||| |||||||| | |||
Sbjct 22247 ATAAAGGTGAAACAAAAAC-ATTCACACCAGAAGAAATATCATCTATGGTTTTGGGAAAA 22305
Query 349565 ATGAAGGAAATTGCTGAAGCAT 349586
|||||||||| ||||||||||
Sbjct 22306 ATGAAGGAAACAGCTGAAGCAT 22327
Score = 95.1 bits (104), Expect = 4e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341
||||||| |||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct 27317 AGGTAACCGAACAACGCCATCATATGTGGCATTTACCGACACTGAACGCCTTATTGGTGA 27376
Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388
| | || |||||||| | ||| || || | ||||| |||||||
Sbjct 27377 TGCAGCTAAAAATCAGGTTGCAATGAACCCGCACAATACTGTTTTTG 27423
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 183691 CACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATAT 183750
|||| || | ||| || || |||||||||| ||| ||||| || || || || ||||||
Sbjct 28259 CACCTCCAAGATGAGTGTCACCAGCAGTAGATTTTACTTCGAAAATACCATCCTCAATAG 28200
Query 183751 TTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
| || || ||||||||||| ||||||||||| | ||||||
Sbjct 28199 TCAAGATAGATACATCAAAAGTACCACCACCAAGATCAAA 28160
Score = 87.8 bits (96), Expect = 5e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562
|||| | || | ||||||||||||||| || ||||| |||||| ||||| ||||
Sbjct 29353 AATTTAGGTTTACGAAGGTGAACGTGCTATGACGAAAGACAATAATCTGCTTGGTAAATT 29412
Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622
| || ||||||||| ||| | || || || || |||||||| |||| ||
Sbjct 29413 CGAGTTGTCTGGAATTCCACCTGCTCCTCGTGGTGTGCCGCAAATTGAAGTTACTTTTGA 29472
Query 350623 TATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAG 350682
|||||| | || || ||||| |||||| ||||| || ||||||| || ||| |
Sbjct 29473 TATTGACGCGAACGGAATTTTGAATGTTTCCGCACAAGATAAATCAACAGGAAAACAGAA 29532
Query 350683 TAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGA 350733
||| | ||||| || |||||| | | ||||| || || |||||
Sbjct 29533 CAAGATTACGATTACCAACGATAAAGGACGTTTGTCAAAGGATGAGATTGA 29583
>seq4886
Length=3728
Score = 149 bits (164), Expect = 2e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| |||||||||||| | |||||| | | ||||||||| |||||||| ||||||||| |
Sbjct 2404 CCTGAAGAAATTTCAGCGATGGTTCTCGGTAAAATGAAAGAAATTGCGGAAGCATATCTT 2345
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| || ||| | |||| ||| | || ||||| || || ||||||||||| || ||
Sbjct 2344 GGAAAAGAAGTGAAACATGCAGTTGTCACAGTACCTGCTTACTTTAATGATGCACAACGC 2285
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || |||||||| || | ||||| || | |||||| | | || || ||||||
Sbjct 2284 CAAGCCACTAAAGATGCAGGTACTATTGCCGGCCTCAATGTTGTCCGTATCATCAATGAA 2225
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746
|| || ||||| || ||||| |||||||| |||||
Sbjct 2224 CCAACAGCTGCCGCTATTGCTTATGGGCTGGATAA 2190
Score = 91.5 bits (100), Expect = 4e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 349766 AATATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825
||||||||| |||||||| | || ||||| ||||||||||| || || | || ||||
Sbjct 1929 AATATTCTTGTTTTTGATCTTGGCGGTGGAACTTTTGATGTGTCGATATTGACGATTGAT 1870
Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885
| || |||| ||||| ||| || ||||||||| || | ||||| |||||||||
Sbjct 1869 AATGGTGTTTTCGAAGTATTAGCTACCAATGGTGATACTCACTTGGGTGGTGAAGATTTT 1810
Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
|| | || | | ||||||| |||||| ||| ||
Sbjct 1809 GACCAGCGAGTTATGGAGCATTTTATTAAAGTATTCAA 1772
>seq26370
Length=891
Score = 132 bits (146), Expect = 1e-25
Identities = 135/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799
||||||| ||| |||||||| ||||| || |||||||| ||||||| ||| || ||| |
Sbjct 647 CCTCCAATCATCACAAAATCTGCTCCAGCACCAAATGCCTTCGCAACATCGCCAGGATTT 706
Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859
| || || ||||| |||||||| ||||| || ||||||| ||||| ||||| |||
Sbjct 707 GTGCATCCTCCATCGCTCATAACATGCCCATTCAAACCATGTGAAGCATCGGCACATTCT 766
Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAAC 130915
| | |||| ||||||||||| |||||||| | | ||| | || ||||||||
Sbjct 767 AACACAGCACTCAGTTGTGGATAACCAACTCCCGCTTTTTTCCGGGTCGTACAAAC 822
>seq21486
Length=1089
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| || ||||| || || || || || |||||||| || || | || || |||||
Sbjct 165 AGAACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCC 224
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| ||||||||||| |||||||| | || || ||||| || ||||| || || || |||
Sbjct 225 TCCAGTTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTCC 284
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || ||||| || || || || | ||| || | || ||||| | || | ||
Sbjct 285 TGAATCTTTGCTTTAACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTT 344
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || |||| ||||| || ||||| ||||||
Sbjct 345 TTACCCGTTAAAGTTTTAACGAAAATTTGCATT 377
Score = 127 bits (140), Expect = 6e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|| ||||| || ||||| |||||||||||||| || || ||||||||||||||||| |||
Sbjct 584 CCTGCAAAAATAAGACGCTGCTGATCAGGAGGGATGCCCTCTTTATCCTGAATTTTGGCT 643
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| || |||| ||| || | ||| ||||| || || | || || || || ||
Sbjct 644 TTCACATTCTCGATCGTATCCGAAGCTTCTACTTCCAGCGTTATGGTTTTGCCAGTAAGC 703
Query 140718 GTTTTTACAAAAATCTGCAT 140737
|| ||||| |||||||||||
Sbjct 704 GTCTTTACGAAAATCTGCAT 723
Score = 122 bits (134), Expect = 3e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| || || ||||| |||||||| || |||||||||||||| || ||||| || ||
Sbjct 900 CCAGCGAAAATAAGACGCTGCTGATCTGGCGGAATTCCTTCTTTGTCTTGAATCTTGGCC 959
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||| | ||||||||| || || | ||| || || || |
Sbjct 960 TTTACATTTTCGATTGTATCAGAGGCTTCAACTTCTAGAGTGATTGTTTTGCCTGTCAAC 1019
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||||||||| || |||||
Sbjct 1020 GTTTTTACAAAGATTTGCAT 1039
>seq13328
Length=1679
Score = 127 bits (140), Expect = 6e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || ||||| || || |||||||||||||| || || ||||| |||||||||||||||
Sbjct 189 TTACCTGCAAAAATAAGTCGTTGCTGATCAGGTGGGATACCTTCCTTATCCTGAATTTTA 130
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|| || ||||| ||||| | |||||| | ||| || ||||| |||| ||||| || ||
Sbjct 129 GCCTTCACATTCTCAATGGTATCAGACGATTCTACCTCAAGGGTAATCGTCTTACCAGTC 70
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
| |||||| || || || |||||
Sbjct 69 AATGTTTTCACGAATATTTGCAT 47
>seq2700
Length=5623
Score = 123 bits (136), Expect = 8e-23
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || ||||| || | || |||||||| ||||| || |||||||| |||||||| ||
Sbjct 544 TTACCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTC 603
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
||||||||||| ||||||| ||| || | ||| || |||||||| | ||||| || |||
Sbjct 604 GCTTTTACATTTTCAATCGTATCCGAGGATTCGACCTCAAGTGTGATCGTCTTACCAGTT 663
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
| || ||||| ||||| |||||
Sbjct 664 AAAGTCTTTACGAAAATTTGCAT 686
>seq39641
Length=587
Score = 122 bits (134), Expect = 3e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| ||||| | || || ||||| || |||||||||||||| ||||| ||||| |||
Sbjct 326 CCAGCGAAGATCAATCGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTCGCT 267
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| || || | |||||||| ||| ||||| | ||| | || || || || ||
Sbjct 266 TTCACATTCTCGATAGTATCAGATGCTTCTACTTCCAATGTGATCGTTTTACCAGTAAGA 207
Query 140718 GTTTTTACAAAAATCTGCAT 140737
|||||||||||||| |||||
Sbjct 206 GTTTTTACAAAAATTTGCAT 187
>seq9851
Length=2160
Score = 109 bits (120), Expect = 2e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| ||||| | || || ||||| || |||||||| ||||| ||||| ||||| ||
Sbjct 1333 CCAGCGAAGATCAATCGCTGTTGATCTGGTGGAATTCCCTCTTTGTCCTGGATTTTCGCC 1392
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| || || | |||||||| ||| ||||| | ||| | || || || || ||
Sbjct 1393 TTAACATTCTCGATGGTATCAGATGCTTCTACTTCGAATGTGATCGTTTTACCAGTAAGA 1452
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||||||||| || |||||
Sbjct 1453 GTTTTTACAAAGATTTGCAT 1472
Score = 91.5 bits (100), Expect = 4e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| || || ||||| |||||||| || |||||||||||||| || ||||| || ||
Sbjct 945 CCAGCGAAAATAAGACGCTGCTGATCTGGCGGAATTCCTTCTTTGTCTTGAATCTTGGCC 1004
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || |||||| | |||| ||| | || ||||| || | | |
Sbjct 1005 TTTACATTTTCGATTTTATCAGAGGCTTCAGCTTTTAAAGTGACTGTTTTGTCCTCCAAT 1064
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||| ||||||| | |||
Sbjct 1065 TTTTTTGCAAAAATTTTCAT 1084
>seq5858
Length=3261
Score = 105 bits (116), Expect = 2e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
||||| ||| |||| || |||||||||||||| |||||||||||||| || |||||
Sbjct 2969 TGTTTACCATCAAAAATAAGACGTTGCTGATCTAATGGAATTCCTTCTTTTTCTTGAATC 2910
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
| | |||||| | || || | |||||| | ||||||||| | || | ||| || ||
Sbjct 2909 CTGTCCTTTACAATTTCGATTGTATCAGAAGTTTCAACTTCTAAAGTGATTGTTTTGCCC 2850
Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737
| | |||||||||||||| |||||
Sbjct 2849 TTCAACGTTTTTACAAAAATTTGCAT 2824
>seq471
Length=13412
Score = 98.7 bits (108), Expect = 3e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228
|||| ||||| |||||| || ||||||| | ||| | ||||| || || || ||
Sbjct 1415 TTTCGCACAGTACCATCATAACTGACCATTACACTTTCCATAGCTTTGATCAGCCGGCGT 1474
Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288
||| || ||||||| ||||| || |||||||| || | ||| |||| ||||||
Sbjct 1475 TGAATGTAGCCAGTTTCTGCTGTTTTTACAGCAGTATCGATAAGACCTTCACGGCCACCC 1534
Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348
|||||||| ||||| ||||| | ||||| || || | | | ||||| | || | |||
Sbjct 1535 ATTGCATGAAAGAAGAATTCGGACGGAGTCAGCCCTGCTAGATATGAATTTTCGACAAAA 1594
Query 378349 CCTCTTG 378355
||| |||
Sbjct 1595 CCTTTTG 1601
>seq13
Length=34373
Score = 91.5 bits (100), Expect = 4e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836
||||||| || | ||| || ||| | | | ||||||| ||||||| ||||| || |
Sbjct 23126 ATCCACCGGCACAGTGTAGTGCAGGACCAGTTGGTGATGATCTTTTTCACTGGCAGGCTA 23067
Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896
| || ||||| ||| ||| | || |||||||||||| | ||| | | ||| |||
Sbjct 23066 CTATAATGGGTCCACCAGAATCACCATATCAAGGTGGTGTGTTTTTCCTGACCATTCATT 23007
Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTA 54931
|||| ||||||||||||||||| ||||| |||
Sbjct 23006 TTCCGACGGATTATCCATTTAAACCACCAAAGGTA 22972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514371597634016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |