Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1506 95.1 9e-15 >seq1506 Length=14399 Score = 95.1 bits (104), Expect = 9e-15 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120 ||| || || || |||||||| ||||| |||||| ||| |||| || ||||| | || Sbjct 6784 CTGGAAGCCGTAAACAGGTCCCAGATCACCTTCAGCTCGGTCACTGAATCCAAGCTGGTC 6843 Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTT 102179 | |||| | ||||||||| ||||||||||| | || || | |||| | ||| Sbjct 6844 GAGAAATTGGCGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATAAATGCTT 6903 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 ||| | ||| ||||| || ||||| |||| |||||||||||| || ||||||| | Sbjct 6904 TGC-ATTTGTATCTCCTCGAATGAACCATAACAATTCTTCAACAACGCCCTTCCAAAAGA 6962 Query 102240 C 102240 | Sbjct 6963 C 6963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361162075151993