Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1506 95.1 8e-15 >seq1506 Length=14399 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATC- 97484 ||||| || ||||||||||| || || ||||| ||| |||| ||| ||||||| || Sbjct 6785 TGGAAGCCGTAAACAGGTCCCAGATCACCTTCAGCTCGGTCACTGAATCCAAGCTGGTCG 6844 Query 97485 -TAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC-AGATGCTGCAAGCTCT 97542 |||| || | ||||||||| ||||||||||| | ||||| || || || Sbjct 6845 AGAAATTGG--CGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATAAATGCT 6902 Query 97543 TTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAAT 97602 |||| | ||| ||||| || ||||| ||||||||||| ||||| || ||||||| Sbjct 6903 TTGC-ATTTGTATCTCCTCGAATGAACCATAACAATTCTTCAACAACGCCCTTCCAAAAG 6961 Query 97603 ACTCTCTTAGTTGTTAA 97619 || | || ||||| || Sbjct 6962 ACACGTTTGGTTGTCAA 6978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346698444377510