Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq9110 107 2e-18
>seq9110
Length=1366
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 139534 ATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC 139593
|| |||||| || | ||| | ||| | ||||| ||| || ||||||||||| ||||||||
Sbjct 453 ATAGCCGCCGCGAAGACGAAGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATC 394
Query 139594 GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 139653
|| || | ||| || | |||||| || ||| |||| || ||||||||||| ||
Sbjct 393 CGACAGCGTACGACCGTCCTCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGG 334
Query 139654 AGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| ||| ||| | | || | || || | || ||
Sbjct 333 TGGAATGCCCTCCTTGTCTTGGATCTTTGCTTTAACGTTCTCGATAGTATCAGAGGCTTC 274
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | || | || ||||| || | || |||||||| || ||||||
Sbjct 273 TACCTCCAGCGTTATGGTTTTGCCAGTAAGTGTCTTTACGAAAATCTGCATA 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495938477205600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |