Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq8094 122 7e-23 >seq8094 Length=1710 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||| || || |||| ||||| |||| ||||||||||| |||||||| Sbjct 977 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCGTCCTCCAATTGTTTTCCGGCAAAG 1036 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||||||||||||||| | || | || || || || |||| |||| || | Sbjct 1037 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTATCCTGGATCTTTGCTTTAACGTTT 1096 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 | | || || |||||| || || | |||||| ||||| || |||| ||||||||| Sbjct 1097 TCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTCACG 1156 Query 43099 AAAATTTGCATT 43110 |||||||||||| Sbjct 1157 AAAATTTGCATT 1168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381275511710094