Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq9110 93.3 3e-14
>seq9110
Length=1366
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
||||| |||||||| ||||| ||||| |||| | | ||| ||||| || |||||
Sbjct 419 GTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCCTCCAACTGTTTTCCG 360
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292
||| |||| |||||||| |||| || ||||| || || || ||| || |||
Sbjct 359 GCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCCTTGTCTTGGATCTT-TGCTTT 301
Query 33293 ACTGTT-TGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGT 33351
| ||| | || || || || || || ||||| ||||| ||||| || ||||| ||
Sbjct 300 AACGTTCTCGATAGTATCAGAGGCTTCTACCTCCAGCGTTATGGTTTTGCCAGTAAGTGT 241
Query 33352 TTTTACGAAAATTTGCAT 33369
||||||||||| |||||
Sbjct 240 CTTTACGAAAATCTGCAT 223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318698953880214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |