Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq161 82.4 9e-11 >seq161 Length=57655 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971 || ||||||||||| || ||||| || | || || ||||| || ||||| | ||| Sbjct 26196 TTACCACGAAGAGGAAATACACCATATTTGTCACGTCCAACAACCCCCAGACCTGAAACA 26137 Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGCC 177031 || | || ||| || |||||||| || || | || || ||||||| |||| | | Sbjct 26136 GCCAACGATTTGGCTGAATCACCTTCCGTAAGAATAAGCGTACACTGTGCAGAATTCTTC 26077 Query 177032 GTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACC 177069 ||||| || | ||| ||||| |||||||| || | ||| Sbjct 26076 GTACCAGCATCGTTAGCATCTTCCAATTTTGGCACACC 26039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620585328894960