Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq161 96.9 4e-15 >seq161 Length=57655 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 169362 TTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACC 169421 || ||||| |||||||| || ||||| | ||||||||||| || ||||| | || Sbjct 26196 TTACCACGAAGAGGAAATACACCATATTTGTCACGTCCAACAACCCCCAGACCTGAAACA 26137 Query 169422 GCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGATTGCGCC 169481 || | | ||| ||||||||||| ||||| | ||| || ||||||| | |||| | | | Sbjct 26136 GCCAACGATTTGGCTGAATCACCTTCCGTAAGAATAAGCGTACACTGTGCAGAATTCTTC 26077 Query 169482 GTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACC 169519 ||||| || | ||| || || ||||| || || | ||| Sbjct 26076 GTACCAGCATCGTTAGCATCTTCCAATTTTGGCACACC 26039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589831512733320