Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq4652 84.2 4e-11 seq541 84.2 4e-11 >seq4652 Length=4141 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 308 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 252 >seq541 Length=30130 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 14880 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 14824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825707812077720