Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6757 93.3 7e-13 >seq6757 Length=2332 Score = 93.3 bits (102), Expect = 7e-13 Identities = 130/181 (72%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || ||| |||| | ||||| ||||||| ||||| ||| || ||| || || ||| Sbjct 1046 TATTTGATGACCACGTTGGTGGCCTCTGACACGGCATGCTTGCCCATCTCCCCAGGCAGC 987 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || | |||| | |||||||||||| | || | ||| |||| ||||||||| |||| Sbjct 986 AGCAAGTGCACAGAGGTCTGGATCTCTCTGGAG-TGATGGTGTGGCGCTTGTTGTTGCGG 928 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||||| | || ||||| | | ||| | |||| ||| || | || || || |||||| Sbjct 927 GCCAGGTGCCCAGCCTCTTCGGCAATGTGCTCGAACATATCCATCACGAAGGAATTCATG 868 Query 1485652 A 1485652 | Sbjct 867 A 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914093059761677