Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9110 96.9 3e-15 >seq9110 Length=1366 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || ||||| || ||||| ||||| || ||| |||| |||||| | ||| || | Sbjct 419 GTCGATTCTTTTTGAATATTATAATCCGACAGCGT--ACGACCGTCCTCCAACTGTTTTC 362 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || || ||||| || || || ||||| |||||||| ||||||| ||| Sbjct 361 CGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCCTTGTCTTGGATCTTT-GCT 303 Query 133582 TGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | | | | ||| | || || | || || || || | || | ||||||||| || || Sbjct 302 TTAACGTTCTCGATAGTATCAGAGGCTTCTACCTCCAGCGTTATGGTTTTGCCAGTAAGT 243 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || ||||||||||||||||| Sbjct 242 GTCTTTACGAAAATCTGCAT 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483298476409320