Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq9110 96.9 3e-15
>seq9110
Length=1366
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/200 (72%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| || ||||| || ||||| ||||| || ||| |||| |||||| | ||| || |
Sbjct 419 GTCGATTCTTTTTGAATATTATAATCCGACAGCGT--ACGACCGTCCTCCAACTGTTTTC 362
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || || ||||| || || || ||||| |||||||| ||||||| |||
Sbjct 361 CGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCCTTGTCTTGGATCTTT-GCT 303
Query 133582 TGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
| | | | ||| | || || | || || || || | || | ||||||||| || ||
Sbjct 302 TTAACGTTCTCGATAGTATCAGAGGCTTCTACCTCCAGCGTTATGGTTTTGCCAGTAAGT 243
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| |||||||||||||||||
Sbjct 242 GTCTTTACGAAAATCTGCAT 223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483298476409320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |