Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq231 84.2 5e-11
>seq231
Length=48944
Score = 84.2 bits (92), Expect = 5e-11
Identities = 112/153 (73%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 167199 CGAAATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTA 167258
||||||| || || ||||| || || |||| || |||||| | ||||||||
Sbjct 6804 CGAAATACGTCGAATGAGCAGAGCAACTCATTATCAACAGTCATTATTGCTGCAGCATTA 6745
Query 167259 TCGAATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAA 167317
|| |||||| |||| |||| ||| || ||||| | ||| || ||||||||||| |||
Sbjct 6744 TCAAATTCAC-CGCAATAATGTGGAGCCGAAAAGATAGTCACCAATTTACGATTCGCAAA 6686
Query 167318 TAATTCATAACCATCTTCAACAACTTCATGGGC 167350
|||||||| ||||||| || || | ||| ||
Sbjct 6685 AAATTCATATCCATCTTGGACGACCTGATGTGC 6653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186504984152523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |