Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq8094 91.5 1e-13 >seq8094 Length=1710 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || || || || || || || || |||| |||||||||||||||||||| Sbjct 977 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCGTCCTCCAATTGTTTTCCGGCAAAG 1036 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| ||||| |||||| | || | || || || || || || || || ||| | Sbjct 1037 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTATCCTGGATCTT-TGCTTTAACGTT 1095 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||| || | ||||| || | ||| || |||||||| ||||| ||||| || Sbjct 1096 TTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTCAC 1155 Query 33738 AAAGATCTGCAT 33749 || || ||||| Sbjct 1156 GAAAATTTGCAT 1167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328622904922560