Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq8094 100 3e-16 >seq8094 Length=1710 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || || | || || || |||| |||| || || || ||||| Sbjct 977 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCGTCCTCCAATTGTTTTCCGGCAAAG 1036 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| || || | |||| || |||||| ||| ||||||| |||| | ||| Sbjct 1037 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTATCCTGGATCTTT-GCTTTAACGTT 1095 Query 35666 GCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || | ||||| |||| ||| || ||||||||||| ||||||||||| Sbjct 1096 TTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTCAC 1155 Query 35725 AAATATCTGCATTC 35738 || || ||||||| Sbjct 1156 GAAAATTTGCATTC 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450679532314440