Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq9110 82.4 5e-11
>seq9110
Length=1366
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/233 (68%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||| || || || |||||||| ||| || || | || || ||| | |
Sbjct 223 ATGCAGATTTTCGTAAAGACACTTACTGGCAAAACCATAACGCTGGAGGTAGAAGCCTCT 282
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
|| ||| |||| || ||| ||| || ||||| || || |||| ||
Sbjct 283 GA-----TACTATCGAGAACGTTAAAGCAAAGATCCAAGACAAGGAGGGCATTCCACCGG 337
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| |||||||| |||| |||||||||||||| ||||| |||| || | |||| ||||
Sbjct 338 ATCAGCAACGACTAATCTTTGCCGGAAAACAGTTGGAGGACGGTCGTACGCTGTCGGATT 397
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
| || || |||||||| || | || ||||| | ||| | || ||||||
Sbjct 398 ATAATATTCAAAAAGAATCGACGCTTCACCTGGTTCTTCGTCTTCGCGGCGGC 450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355774604631261
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |