Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04]
20,243 sequences; 91,660,559 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq8094 116 9e-21
seq10810 87.8 4e-12
>seq8094
Length=1710
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || |||||||| || || || || ||||| ||||| |||| || ||
Sbjct 947 CGAAGACGAAGAACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCCGACAGCGTA 1006
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || |||| || || || || ||||| | || ||||| || || |||| ||
Sbjct 1007 CGACCGTCCTCCAATTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGTGGAATGCCC 1066
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| |||||||||||| ||| |||||||||||||| || || || || || |
Sbjct 1067 TCCTTATCCTGGATCTTTGCTTTAACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAC 1126
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || ||||| | ||| || || || | ||||||
Sbjct 1127 GTTATGGTTTTACCCGTTAAAGTTTTCACGAAAATTTGCATT 1168
>seq10810
Length=964
Score = 87.8 bits (96), Expect = 4e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||||||||| || || |||| || ||||| |||||||| ||| ||| || || ||
Sbjct 808 AGGCGTTGTTGTTCCGGCGGAATACCCTCCTTATCCTGGATTTTTGCTTTAACATTCTCA 867
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
| ||||| || ||| || || ||| |||| || ||||| || | |||||||||||
Sbjct 868 ACCGTGTCTGACGCTTCCACTTCAAGAATGATTGTTTTTCCGGTCAATGTCTTTACAAAG 927
Query 211107 ACCTGCATTTT 211117
| |||||| ||
Sbjct 928 ATCTGCATATT 938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158851358352695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |