Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq5231 109 7e-19 >seq5231 Length=3473 Score = 109 bits (120), Expect = 7e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 155851 TCATTTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAA 155910 ||||| ||||| || | || |||||||| | ||| || |||||| |||||| || Sbjct 2657 TCATTCTAGCAGTATGGATTTTCAAAATTTGTAAACGACCAGCTTCATCAGGTAATGAAA 2716 Query 155911 TTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTC 155970 |||| |||| || |||| || || |||| ||| |||||||||||||| | || || Sbjct 2717 TTTCCATCTGCACCTCCATTCGACCTGGTCGTAACAATGCTTCGTCAATCATATCTTTTC 2776 Query 155971 TGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACA 156030 |||| |||||||| || | | |||||| || | || ||||| || ||||||| | Sbjct 2777 TGTTCGTCATACCAATCACAAGAATGTTATTGAGCTGCTCAACACCATCCATTTTAGCTA 2836 Query 156031 ATAATTGATTGACTACGGCGTCGTG 156055 | || || || ||||| | ||||| Sbjct 2837 ACAACTGGTTAACTACAGTATCGTG 2861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666906404959080