Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 8e-15 >seq2 Length=28345163 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| || ||||||||||| || || ||||| ||| |||| ||| ||||||| || Sbjct 21053250 TGGAAGCCGTAAACAGGTCCCAGATCACCTTCAGCTCGGTCACTGAATCCAAGCTGGTCG 21053191 Query 97486 A--AATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC-AGATGCTGCAAGCTCT 97542 | ||| || | ||||||||| ||||||||||| | ||||| || || || Sbjct 21053190 AGAAATTGG--CGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATAAATGCT 21053133 Query 97543 TTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAAT 97602 |||| | ||| ||||| || ||||| ||||||||||| ||||| || ||||||| Sbjct 21053132 TTGC-ATTTGTATCTCCTCGAATGAACCATAACAATTCTTCAACAACGCCCTTCCAAAAG 21053074 Query 97603 ACTCTCTTAGTTGTTAA 97619 || | || ||||| || Sbjct 21053073 ACACGTTTGGTTGTCAA 21053057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781151386180