Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 >seq2 Length=28345163 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || || ||||||||||| || ||||| || || || ||||| Sbjct 27365419 ACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCCTCC 27365478 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||||||| || |||| || || |||||||| || || |||||||| || || | Sbjct 27365479 AACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCCTGA 27365538 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | |||| || |||| | || || || | || | ||||||| Sbjct 27365539 ATTTTGGCTTTTACATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCGTTTTG 27365598 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| || ||||| |||||||||||| Sbjct 27365599 CCAGTCAGTGTCTTTACGAAAATCTGCATG 27365628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433826836354408