Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 2e-20
seq2 93.3 5e-14
>seq3
Length=25485961
Score = 114 bits (126), Expect = 2e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762
|| ||||| || || |||| |||||||||||||| || || || | |||||||||||||
Sbjct 17642578 AGGATAAAAGCATCAGCTAGGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 17642637
Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822
|| ||| ||||| || | ||||||||||| ||| ||||||||||| | ||||||
Sbjct 17642638 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAATTTTATTCAAATTTCTA 17642697
Query 62823 ACAATTACTTT 62833
|| ||||||||
Sbjct 17642698 ACCATTACTTT 17642708
>seq2
Length=28345163
Score = 93.3 bits (102), Expect = 5e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762
|| ||||| | || |||| |||||||||||||| || || || | |||||||||||||
Sbjct 24879745 AGGATAAAAGTATCAGCTAGGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 24879686
Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822
|| ||| | ||| || | ||||||||||| ||| ||||||||||| | |||| |
Sbjct 24879685 GATCGTTCCGTTTCCGGTACTGGATAATAATTGCGATCAATAATTTTATTCAAATTTTTA 24879626
Query 62823 ACAATTACTTT 62833
|| | ||| ||
Sbjct 24879625 ACCACTACCTT 24879615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622941951669840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |