Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=28345163 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 ||||| || ||||||||||| |||||| || || ||||| | |||||| ||||| ||| Sbjct 20052939 ACTTCATCAACAGTCCAAAATGATGCTAAGGCCTTCTTGTAAAAATCCCAAATGTCATGA 20052998 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATC 93690 ||| ||| |||||||| ||||||||||| || || || Sbjct 20052999 AATTTAATAGGAAATATAACAAAACGATTTGGATTTTC 20053036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 |||| |||| ||| ||||||||||| || || ||||| || | || || || || | Sbjct 20051796 CTTCATCTCTTGAAATCAACTCATTACTATGCGTCAAACCAGGCATCAAACCGCGCTTTT 20051855 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 | | ||||||||||||||||||||| || || |||||||| ||| Sbjct 20051856 TCAACCAAAATATTGAAGCAAAACTTCCGGAGAAAAATATCCCT 20051899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856108447760