Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 2e-13
>seq2
Length=28345163
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652
||||| || ||||||||||| |||||| || || ||||| | |||||| ||||| |||
Sbjct 20052939 ACTTCATCAACAGTCCAAAATGATGCTAAGGCCTTCTTGTAAAAATCCCAAATGTCATGA 20052998
Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATC 93690
||| ||| |||||||| ||||||||||| || || ||
Sbjct 20052999 AATTTAATAGGAAATATAACAAAACGATTTGGATTTTC 20053036
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173
|||| |||| ||| ||||||||||| || || ||||| || | || || || || |
Sbjct 20051796 CTTCATCTCTTGAAATCAACTCATTACTATGCGTCAAACCAGGCATCAAACCGCGCTTTT 20051855
Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217
| | ||||||||||||||||||||| || || |||||||| |||
Sbjct 20051856 TCAACCAAAATATTGAAGCAAAACTTCCGGAGAAAAATATCCCT 20051899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556856108447760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |