Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 6e-16
seq4 98.7 2e-15
>seq6
Length=1564000
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||
Sbjct 666140 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 666081
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 666080 CCCCGCATCGGGC 666068
>seq4
Length=16644688
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 11862976 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 11862917
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 11862916 CCCGCATCGGGC 11862905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027827923986834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |