Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 >seq2 Length=28345163 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || ||||| || | |||||||| ||||| |||||| ||| ||||| ||||| Sbjct 27366326 CCAGCGAAAATCAATCGCTGCTGATCCGGTGGAATTCCCTCTTTGTCCTGGATCTTCGCT 27366385 Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609 || ||| |||| ||| || | || ||| || ||||| ||||| || ||||| || ||| Sbjct 27366386 TTAACGTTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCAGTAAGA 27366445 Query 199610 GTTTTCACAAAAATTTG 199626 ||||| ||||||||||| Sbjct 27366446 GTTTTTACAAAAATTTG 27366462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178911419275158