Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
>seq2
Length=28345163
Score = 100 bits (110), Expect = 2e-16
Identities = 166/235 (71%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548
|| |||||| || | ||| || |||| || | || ||||||||| |||||||||||
Sbjct 27365397 ATAGCCGCCGCGAAGACGAAGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATC 27365456
Query 39549 GGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608
| || || | || ||||| ||||| ||| |||| |||| || ||||||||||
Sbjct 27365457 CGACAGCGTACGACCGTCCTCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGG 27365516
Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCT 39665
|| | ||| ||||| || | | |||| | |||| || ||| || || || | |
Sbjct 27365517 TGGAATGCCCTCTTTATC-CTGAATTTTGGCTTTTACATTCTCGATA--GTATCCGAGGC 27365573
Query 39666 TTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||| || ||||| || || ||||| || || | || |||||||| |||||||||
Sbjct 27365574 TTCTACTTCCAACGTTATCGTTTTGCCAGTCAGTGTCTTTACGAAAATCTGCATG 27365628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347366746575842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |