Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 4e-15 >seq2 Length=28345163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 169362 TTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACC 169421 || ||||| |||||||| || ||||| | ||||||||||| || ||||| | || Sbjct 14161045 TTACCACGAAGAGGAAATACACCATATTTGTCACGTCCAACAACCCCCAGACCTGAAACA 14161104 Query 169422 GCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGATTGCGCC 169481 || | | ||| ||||||||||| ||||| | ||| || ||||||| | |||| | | | Sbjct 14161105 GCCAACGATTTGGCTGAATCACCTTCCGTAAGAATAAGCGTACACTGTGCAGAATTCTTC 14161164 Query 169482 GTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACC 169519 ||||| || | ||| || || ||||| || || | ||| Sbjct 14161165 GTACCAGCATCGTTAGCATCTTCCAATTTTGGCACACC 14161202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975829411760