Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 5e-17
>seq2
Length=28345163
Score = 102 bits (112), Expect = 5e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||||| || |||||| ||||| ||||| ||||| || | || | || ||
Sbjct 27365418 AACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCCTC 27365477
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| ||||||||||||||| |||||||||||||| || | || | ||||| || ||
Sbjct 27365478 CAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCCTG 27365537
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || ||| || || || || | || ||| || || || | ||||| |||
Sbjct 27365538 AATTTTGGCTTTTAC--ATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCGTT 27365595
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || || ||||| || || ||||||||
Sbjct 27365596 TTGCCAGTCAGTGTCTTTACGAAAATCTGCAT 27365627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630933337872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |