Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-12 >seq2 Length=28345163 Score = 91.5 bits (100), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || ||||| ||||| ||||| || || || || || || | |||||||| ||| ||| Sbjct 8497941 TATTTGGTAACGGCTTTGGTCCCTTCAGATACAGCATGTTTTGCCAGTTCACCGGGCAAA 8497882 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 || || || ||||| || || || || || | || || ||||||||| | Sbjct 8497881 ATAAGTCGAACGGCAGTTTGAATTTCACGCGATGAAATAGTCGAACGCTTGTTATACTGA 8497822 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||| || | ||||| ||| | || || || | | ||||| ||||||||||||||| Sbjct 8497821 GCCAGACGACTTGCCTCTGTGGCAATACGTTCAAAAACATCGTTTACAAACGAGTTCATG 8497762 Query 1485652 ATCGACAT 1485659 |||||||| Sbjct 8497761 ATCGACAT 8497754 Score = 87.8 bits (96), Expect = 3e-11 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || ||||| ||||| ||||| || || || || || || | |||||||| ||| ||| Sbjct 8483928 TATTTGGTAACGGCTTTGGTCCCTTCAGACACAGCATGTTTTGCCAGTTCACCGGGCAAA 8483869 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 || || || ||||| || || || || || | || || ||||||||| | Sbjct 8483868 ATAAGTCGAACGGCAGTTTGAATTTCACGCGATGAAATAGTCGAACGCTTGTTATACTGA 8483809 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || ||||| | ||||| | | | || || || | | ||||| ||||||||||||||| Sbjct 8483808 GCTAGGCGACTTGCCTCTGCGGCAATACGTTCAAAAACATCGTTTACAAACGAGTTCATG 8483749 Query 1485652 ATCGACAT 1485659 |||||||| Sbjct 8483748 ATCGACAT 8483741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916174703545886