Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 2e-12
>seq2
Length=28345163
Score = 91.5 bits (100), Expect = 2e-12
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|| ||||| ||||| ||||| || || || || || || | |||||||| ||| |||
Sbjct 8497941 TATTTGGTAACGGCTTTGGTCCCTTCAGATACAGCATGTTTTGCCAGTTCACCGGGCAAA 8497882
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
|| || || ||||| || || || || || | || || ||||||||| |
Sbjct 8497881 ATAAGTCGAACGGCAGTTTGAATTTCACGCGATGAAATAGTCGAACGCTTGTTATACTGA 8497822
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
||||| || | ||||| ||| | || || || | | ||||| |||||||||||||||
Sbjct 8497821 GCCAGACGACTTGCCTCTGTGGCAATACGTTCAAAAACATCGTTTACAAACGAGTTCATG 8497762
Query 1485652 ATCGACAT 1485659
||||||||
Sbjct 8497761 ATCGACAT 8497754
Score = 87.8 bits (96), Expect = 3e-11
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|| ||||| ||||| ||||| || || || || || || | |||||||| ||| |||
Sbjct 8483928 TATTTGGTAACGGCTTTGGTCCCTTCAGACACAGCATGTTTTGCCAGTTCACCGGGCAAA 8483869
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
|| || || ||||| || || || || || | || || ||||||||| |
Sbjct 8483868 ATAAGTCGAACGGCAGTTTGAATTTCACGCGATGAAATAGTCGAACGCTTGTTATACTGA 8483809
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|| ||||| | ||||| | | | || || || | | ||||| |||||||||||||||
Sbjct 8483808 GCTAGGCGACTTGCCTCTGCGGCAATACGTTCAAAAACATCGTTTACAAACGAGTTCATG 8483749
Query 1485652 ATCGACAT 1485659
||||||||
Sbjct 8483748 ATCGACAT 8483741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916174703545886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |