Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 3e-13 >seq2 Length=28345163 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || || || ||||| ||||| ||||| || | || | || Sbjct 27365416 AGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCC 27365475 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| || |||||||| ||||| ||||||||||| || | || | ||||| || || Sbjct 27365476 TCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCC 27365535 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| ||| || || || || | || ||| || || || | ||||| | Sbjct 27365536 TGAATTTTGGCTTTTAC--ATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCG 27365593 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || || || || |||||||| || ||||||||| Sbjct 27365594 TTTTGCCAGTCAGTGTCTTTACGAAAATCTGCATG 27365628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690124637206