Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 3e-13
>seq2
Length=28345163
Score = 89.7 bits (98), Expect = 3e-13
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || || || ||||| ||||| ||||| || | || | ||
Sbjct 27365416 AGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCC 27365475
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| || |||||||| ||||| ||||||||||| || | || | ||||| || ||
Sbjct 27365476 TCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCC 27365535
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| ||| || || || || | || ||| || || || | ||||| |
Sbjct 27365536 TGAATTTTGGCTTTTAC--ATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCG 27365593
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || || || || |||||||| || |||||||||
Sbjct 27365594 TTTTGCCAGTCAGTGTCTTTACGAAAATCTGCATG 27365628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690124637206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |