Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 5e-11 >seq3 Length=25485961 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 167199 CGAAATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTA 167258 ||||||| || || ||||| || || |||| || |||||| | |||||||| Sbjct 18247152 CGAAATACGTCGAATGAGCAGAGCAACTCATTATCAACAGTCATTATTGCTGCAGCATTA 18247211 Query 167259 TCGAATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAA 167317 || |||||| |||| |||| ||| || ||||| | ||| || ||||||||||| ||| Sbjct 18247212 TCAAATTCAC-CGCAATAATGTGGAGCCGAAAAGATAGTCACCAATTTACGATTCGCAAA 18247270 Query 167318 TAATTCATAACCATCTTCAACAACTTCATGGGC 167350 |||||||| ||||||| || || | ||| || Sbjct 18247271 AAATTCATATCCATCTTGGACGACCTGATGTGC 18247303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186802551129714