Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 >seq2 Length=28345163 Score = 123 bits (136), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || ||||| ||| | || || ||| |||| ||| | ||||| |||||| Sbjct 27365628 CATGCAGATTTTCGTAAAGACACTGACTGGCAAAACGATAACGTTGGAAGTAGAAGCCTC 27365569 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 |||||||||||| | |||||| |||||| ||||||||||| || || || ||||| Sbjct 27365568 GGATACTATCGAGAATGTAAAAGCCAAAATTCAGGATAAAGAGGGCATTCCACCGGATCA 27365509 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351 |||| |||| || | | ||| ||||| | || || | | | | |||| ||||| Sbjct 27365508 GCAACGACTAATCTTTGCCGGAAAACAGTTGGAGGACGGTCGTACGCTGTC--GGATTAT 27365451 Query 25352 AATATTCAAAAAGAATCCACCATTCA 25377 ||||||||||||||||| || |||| Sbjct 27365450 AATATTCAAAAAGAATCGACGCTTCA 27365425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090650079680