Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 3e-11 >seq2 Length=28345163 Score = 87.8 bits (96), Expect = 3e-11 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| | ||||||||||||||||||||||| ||||| | | || || || | ||| ||| Sbjct 8497748 AAGGCAATGTCGATCATGAACTCGTTTGTAAACGATGTTTTTGAACGTATTGCCACAGAG 8497807 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 || |||| ||||| | | |||||||| || || |||| || || || || Sbjct 8497808 GCAAGTCGTCTGGCTCAGTATAACAAGCGTTCGACTATTTCATCGCGTGAAATTCAAACT 8497867 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || || || ||| ||| |||||||| | || || || || || || |||| Sbjct 8497868 GCCGTTCGACTTATTTTGCCCGGTGAACTGGCAAAACATGCTGTATCTGAAGGGACCA 8497925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177746191461188