Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 188 2e-42 seq5 176 1e-38 seq136 131 5e-25 seq4 127 6e-24 seq100 100 9e-16 >seq2 Length=28345163 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || ||||| || || |||||||||||||||||||| || | || || || || Sbjct 27365416 AGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCC 27365475 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | |||||||| ||||||||||| ||||||||||| || ||||| || ||||||||| Sbjct 27365476 TCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCC 27365535 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 |||||||| ||||||||||| || || | ||| || | ||| ||||| | || | || Sbjct 27365536 TGAATTTTGGCTTTTACATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCGTT 27365595 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| ||||| ||||||||||| Sbjct 27365596 TTGCCAGTCAGTGTCTTTACGAAAATCTGCAT 27365627 Score = 149 bits (164), Expect = 2e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||||||||| | |||||| | | ||||||||| |||||||| ||||||||| | Sbjct 17914923 CCTGAAGAAATTTCAGCGATGGTTCTCGGTAAAATGAAAGAAATTGCGGAAGCATATCTT 17914982 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || ||| | |||| ||| | || ||||| || || ||||||||||| || ||| Sbjct 17914983 GGAAAAGAAGTGAAACATGCAGTTGTCACAGTACCTGCTTACTTTAATGATGCACAACGT 17915042 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || |||||||| || | ||||| || | |||||| | | || || |||||| Sbjct 17915043 CAAGCCACCAAAGATGCAGGTACTATTGCCGGCCTCAATGTTGTCCGTATCATCAATGAA 17915102 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 || ||||| || || || || |||||||| ||||| Sbjct 17915103 CCAACTGCAGCCGCTATCGCTTATGGGCTGGATAA 17915137 Score = 129 bits (142), Expect = 2e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799 ||||||| ||| |||||||| ||||| || |||| ||| ||||||| ||| || ||| | Sbjct 21358854 CCTCCAATCATCACAAAATCTGCTCCAGCACCAAGTGCCTTCGCAACATCGCCAGGATTT 21358913 Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859 | || || ||||| |||||||| ||||| || ||||| | ||||||||||| ||| Sbjct 21358914 GTGCATCCTCCATCGCTCATAACATGCCCATTCAAACCATGAGAAGCATCAGCACATTCT 21358973 Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAAC 130915 | | |||| ||||||||||| |||||||| | | ||| | || |||||||| Sbjct 21358974 AATACAGCACTCAGTTGTGGATAACCAACTCCGGCTTTTTTCCGGGTCGTACAAAC 21359029 Score = 118 bits (130), Expect = 3e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| ||||| | || || || || || |||||||||||||| ||||| ||||| ||| Sbjct 27365806 CCAGCGAAGATCAATCGCTGTTGGTCCGGTGGAATTCCTTCTTTGTCCTGGATTTTCGCT 27365865 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | |||||||| ||| ||||| | ||| | || || ||||| || Sbjct 27365866 TTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATCGTTTTACCGGTAAGA 27365925 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||||||||| || ||||| Sbjct 27365926 GTTTTTACAAAGATTTGCAT 27365945 Score = 113 bits (124), Expect = 1e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| || || | || |||||||| || |||||||| ||||| ||||| || || ||| Sbjct 27366326 CCAGCGAAAATCAATCGCTGCTGATCCGGTGGAATTCCCTCTTTGTCCTGGATCTTCGCT 27366385 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | |||||||| ||| ||||| | ||| | ||| || || || || Sbjct 27366386 TTAACGTTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCAGTAAGA 27366445 Query 140718 GTTTTTACAAAAATCTGCAT 140737 |||||||||||||| ||||| Sbjct 27366446 GTTTTTACAAAAATTTGCAT 27366465 Score = 91.5 bits (100), Expect = 4e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228 |||| ||||| |||||| || ||||||| | ||| | ||||| || || || || Sbjct 20169240 TTTCGCACAGTACCATCATAACTGACCATTACACTTTCCATAGCTTTGATCAGCCGACGT 20169299 Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288 ||| |||||||||| ||||| || |||||||| || | || |||| |||||| Sbjct 20169300 TGAATGTAACCAGTTTCTGCTGTTTTTACAGCAGTATCGATAAGGCCTTCACGGCCACCC 20169359 Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348 |||||||| ||||| || || | ||||| || || | | | ||||| | || | ||| Sbjct 20169360 ATTGCATGAAAGAAGAACTCGGACGGAGTCAGCCCTGCTAGATATGAATTTTCGACAAAA 20169419 Query 378349 CCT 378351 ||| Sbjct 20169420 CCT 20169422 Score = 87.8 bits (96), Expect = 5e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 349766 AATATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||||||||| | |||||| | || ||||| ||||||||||| || || | || |||| Sbjct 17915416 AATATTCTTGTATTTGATCTTGGCGGTGGAACTTTTGATGTGTCGATATTGACGATTGAT 17915475 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 | || |||| ||||| ||| || |||||||| ||| | ||||| ||||||||| Sbjct 17915476 AATGGTGTTTTCGAAGTACTAGCTACCAACGGTGATACTCATTTGGGTGGTGAAGATTTT 17915535 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 ||| | || | | |||||| |||||| ||| || Sbjct 17915536 GATCAGCGAGTTATGGAGCATTTCATTAAAGTATTCAA 17915573 >seq5 Length=16048563 Score = 176 bits (194), Expect = 1e-38 Identities = 197/261 (75%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 349478 GGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGA 349536 |||| |||||||| | |||||||||| || || || || ||||| | | || || Sbjct 8433384 GGTGGTAAACCAAAAGTGCAGGTTGAATACAAGGGCGAGACGAAAACCTTCACT-CCAGA 8433442 Query 349537 AGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGA 349596 ||||||||||||||||||||| |||||||||||||||| |||||||||| | | ||| | Sbjct 8433443 AGAAATTTCATCAATGGTTTTGGTTAAAATGAAGGAAACGGCTGAAGCATTTCTTGGTCA 8433502 Query 349597 AACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGC 349656 |||| | ||||||||| | || || ||||| ||||| ||||| | ||||| || Sbjct 8433503 TGCAGTCAAGGATGCTGTTGTCACAGTCCCAGCATATTTCAATGACTCACAGCGACAAGC 8433562 Query 349657 AACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCAC 349716 ||| |||||| |||| || || || ||||||| || |||| || |||||||| || Sbjct 8433563 AACTAAAGATTCTGGTGCAATCGCTGGTCTAAATGTCCTGCGAATTATCAATGAACCAAC 8433622 Query 349717 TGCTGCAGCAATTGCATATGG 349737 || || || ||||| ||||| Sbjct 8433623 AGCAGCCGCTATTGCCTATGG 8433643 Score = 116 bits (128), Expect = 1e-20 Identities = 191/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 |||| || | |||||||||||||||| || ||||| |||||| ||||| |||| Sbjct 8434949 TTCAGGTTTATGAAGGTGAACGTGCTATGACGAAAGACAATAATCTGCTTGGTAAATTCG 8435008 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 | || |||||| || ||| | || || || || ||||||||| | ||||||| Sbjct 8435009 AATTGTCTGGAATTCCGCCTGCTCCTCGCGGTGTGCCGCAAATTGAAGTCACATTCGATA 8435068 Query 350625 TTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTA 350684 |||| | ||||||||||| |||||| ||||| || ||||||| || ||| | | Sbjct 8435069 TTGACGCGAATGGTATTTTGAATGTTTCCGCACAAGATAAATCAACAGGAAAACAGAACA 8435128 Query 350685 AGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACAC 350744 || | |||||| ||||| ||| | | ||||| || || |||||| |||| || Sbjct 8435129 AGATTACAATTACCAATGACAAAGGACGTTTGTCAAAGGATGAGATTGAGCGAATGGTAC 8435188 Query 350745 AAGATGCCGAATCATATGCTAAGGAAGATGAAGAA 350779 | || || || ||| ||||| ||||| ||| Sbjct 8435189 AGGAAGCTGAGAAATA---TAAGGCGGATGATGAA 8435220 Score = 111 bits (122), Expect = 5e-19 Identities = 211/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 182753 TTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGCATACTT 182812 ||| ||| |||||| || |||||| |||| | | ||||| || ||| || Sbjct 8435259 TTCGAGAGCATTTTTCGCTGCAATACGATCTTTCTGTGCTTCATCATCCGCCTTATATTT 8435200 Query 182813 TTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGT 182872 ||||| ||| | ||||| || || ||||| || || | | | ||| ||||| || Sbjct 8435199 CTCAGCTTCCTGTACCATTCGCTCAATCTCATCCTTTGACAAACGTCCTTTGTCATTGGT 8435140 Query 182873 AATTACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACC 182932 |||| | || | | ||| |||||||| || ||||| |||||| |||||||| Sbjct 8435139 AATTGTAATCTTGTTCTGTTTTCCTGTTGATTTATCTTGTGCGGAAACATTCAAAATACC 8435080 Query 182933 ATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAAT 182992 ||| | ||||| ||| |||| |||||||| || || ||||| || || || ||||| Sbjct 8435079 ATTCGCGTCAATATCGAATGTGACTTCAATTTGCGGCACACCGCGAGGAGCAGGCGGAAT 8435020 Query 182993 TCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTC 183052 ||||| || |||| ||| | |||||| ||||| || | || | || ||||| Sbjct 8435019 TCCAGACAATTCGAATTTACCAAGCAGATTATTGTCTTTCGTCATAGCACGTTCACCTTC 8434960 Query 183053 ATATACTTGAA 183063 ||| || |||| Sbjct 8434959 ATAAACCTGAA 8434949 Score = 107 bits (118), Expect = 6e-18 Identities = 178/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 |||||||||||||| || || || | || || | | ||| || || || || Sbjct 8429128 ATTGAAATTGATTCACTCTTCGACGGTACTGACTTTTACACTAGTATCACCCGAGCCCGT 8429187 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 |||||||| | ||| ||| | || | |||| |||||||| || || |||| ||| Sbjct 8429188 TTTGAAGAGCTTTGTGCTGATTTGTTCCGTTCAACCATGGATCCCGTTGAGAAAGCATTG 8429247 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 ||||| || ||| ||| ||| || |||| | ||||| ||||| |||||||| Sbjct 8429248 CGTGATGCTAAGATGGATAAAGCTCAAATGCATGATATTGTTTTGGTTGGCGGTTCTACT 8429307 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269 |||||||||||||| ||| | || || || || || ||| ||| ||||||| | | Sbjct 8429308 CGTATTCCAAAAGTACAAAAATTGCTCTCCGATTTCTTTTCTGGAAAAGAACTGAACAAA 8429367 Query 350270 TCAATTAATCCAGATGA 350286 |||||||||||||| Sbjct 8429368 AGCATTAATCCAGATGA 8429384 Score = 107 bits (118), Expect = 6e-18 Identities = 182/259 (70%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 182808 TACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCA 182867 |||||||| || ||| ||||||||| |||||||| || || | | | ||| |||| Sbjct 8430073 TACTTTTCGGCTTCCGCAACCATTCTTTCGATTTCATCCTTCGACAAACGTCCTTTATCA 8430014 Query 182868 TTTGTAATTACTACATTACTA-GTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAA 182926 || |||||| | ||| || | | | ||||| ||||| || |||| ||||||| Sbjct 8430013 TTAGTAATTGTAATCTTATTATGCTTC-CCAGTGGATTTATCCTGTGCTGAGACATTTAG 8429955 Query 182927 AATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGG 182986 |||||| || | || | |||||| | ||||| || ||||||||||| || || || Sbjct 8429954 AATACCGTTTGCATCGATATCAAAAGTGACTTCGATTTGTGGAACACCACGAGGAGCAGG 8429895 Query 182987 TGGAATTCCAGTTAAAGT--AAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTC 183044 |||||||||| ||||| |||| ||| || ||||||||| | || | || | Sbjct 8429894 CGGAATTCCAG--AAAGTTCGAATTTACCCAACAAGTTATTATCTCTCGTCATCGCACGT 8429837 Query 183045 TCGCCTTCATATACTTGAA 183063 || ||||| || || |||| Sbjct 8429836 TCACCTTCGTAAACCTGAA 8429818 Score = 104 bits (114), Expect = 7e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 350029 TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 ||| || ||||||||| ||| | || || | ||||| | || ||||| ||||| | Sbjct 8434221 TATCGAGATTGATTCT-TTGTTCGAGGGGATCGATTTTTACACAAACATTACGCGTGCCC 8434279 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | ||||||||| ||||| ||| | || | |||| |||||||| || || |||| || Sbjct 8434280 GTTTTGAAGAACTATGTGCTGATTTGTTCCGCTCAACCATGGATCCGGTTGAGAAAGCAT 8434339 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 | || || || ||| ||| ||| || |||| | || |||| ||||| || | Sbjct 8434340 TGCGTGACGCCAAGATGGATAAAGCTCAAGTTCATGACATTGTACTAGTAGGTGGATCAA 8434399 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267 | |||||||| ||||| || | | || || || || || ||||||||||| || Sbjct 8434400 CGCGTATTCCGAAAGTACAGAAACTTCTCTCAGATTTCTTCTCTGGCAAAGAACTGAATA 8434459 Query 350268 GATCAATTAATCCAGATGAAG 350288 | |||||||||||||||| Sbjct 8434460 AAAGTATTAATCCAGATGAAG 8434480 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| |||||| | |||||||||||||| |||||||| | ||||| |||| || | Sbjct 8433778 TTCTTATCTTTGATCTTGGTGGTGGTACTTTCGATGTATCTATCCTAACCATTGAGGACG 8433837 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 | ||||| ||||| ||| | || |||||||| || |||||||| || Sbjct 8433838 GTATTTTCGAAGTAAAATCTACGGCTGGTGACACTCATCTTGGAGG 8433883 Score = 98.7 bits (108), Expect = 3e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 ||||| || | ||||||||||| ||||| |||||| | || || ||||| |||||| Sbjct 8428196 GATGCCGTAGTAACTGTACCAGCGTATTTCAATGATTCTCAACGACAAGCAACCAAAGAT 8428255 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || |||| | || | ||||| || |||| || || || || |||||||| || Sbjct 8428256 GCGGGTGCCATTTCTGGCCTGAATGTCCTTCGAATCATCAACGAGCCAACTGCTGCTGCT 8428315 Query 349727 ATTGCATATGGGCTTGATAAAA 349748 ||||||||||| || ||||||| Sbjct 8428316 ATTGCATATGGTCTAGATAAAA 8428337 Score = 98.7 bits (108), Expect = 3e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 ||||||| ||||||| |||||||| || ||||||||||| ||||| || | |||||||| Sbjct 8432923 AGGTAACCGAACAACACCATCATATGTGGCATTTACCGACACTGAACGCCTTATTGGTGA 8432982 Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388 | | || |||||||| | ||| |||||| | ||||| ||||||| Sbjct 8432983 TGCGGCCAAAAATCAGGTTGCAATGAATCCACATAATACTGTTTTTG 8433029 Score = 96.9 bits (106), Expect = 1e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 ||||||||| | ||||| || ||||||||||| ||| | |||| |||| || || ||| Sbjct 8428519 ATTTTTGATCTTGGTGGAGGCACTTTTGATGTGTCAATTTTAACTATTGAGGATGGTATT 8428578 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 |||||||| ||| |||| ||||| ||||| |||||||| || Sbjct 8428579 TTTGAAGTAAAATCAACCGCTGGAGATACTCATCTTGGAGG 8428619 Score = 93.3 bits (102), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 350288 GCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG----AAATAAGA-GTT 350342 ||||| || ||||||||||| || || ||| | |||||||| || |||| ||| | | Sbjct 8429496 GCTGTAGCTTATGGTGCTGCAGTGCAAGCAGCAATTTTATCAGGCGATAAATCAGATGCT 8429555 Query 350343 CTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTT 350402 || || |||||| | ||| ||||||| | ||| | || || || | |||||| Sbjct 8429556 GTACAA-----GATCTACTGCTATTAGATGTTGCACCATTATCACTAGGTATCGAAACTG 8429610 Query 350403 CTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCC 350462 |||||| |||||||||| | || ||||||| || | || ||||||| || | Sbjct 8429611 CTGGTGGTGTAATGACTGCGTTAATAAAAAGAAATACAACCATTCCAACAAAAACATCGC 8429670 Query 350463 AAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 | || || |||| | | | |||||||| |||| ||| || ||||| Sbjct 8429671 AGACATTCACTACCTATTCCGATAATCAACCAGGAGTATTGATCCAAGT 8429719 Score = 91.5 bits (100), Expect = 4e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 |||| || | |||||||||||||| || | ||||||||| | || |||| Sbjct 8429818 TTCAGGTTTACGAAGGTGAACGTGCGATGACGAGAGATAATAACTTGTTGGGTAAATTCG 8429877 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 || || |||||| || ||| | || ||||| || || |||||| |||| |||| Sbjct 8429878 AACTTTCTGGAATTCCGCCTGCTCCTCGTGGTGTTCCACAAATCGAAGTCACTTTTGATA 8429937 Query 350625 TTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTA 350684 | ||| |||| |||||| ||||||| | ||| || ||||| | ||| || || || Sbjct 8429938 TCGATGCAAACGGTATTCTAAATGTCTCAGCACAGGATAAATCCACTGGGAAGCATAATA 8429997 Query 350685 AGGTAGAAATTACTAATGATAAA 350707 || | |||||||||||||||| Sbjct 8429998 AGATTACAATTACTAATGATAAA 8430020 Score = 86.0 bits (94), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 183069 ACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTT 183128 ||| |||| |||||||| ||| |||| || ||| | | || | ||||| ||| Sbjct 8429707 ACTCCTGGTTGATTATCGGAATAGGTAGTGAATGTCTGCGATGTTTTTGTTGGAATGGTT 8429648 Query 183129 GAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAAT 183188 | ||||| | | |||||||||| | | |||||||| | |||| ||||||| Sbjct 8429647 GTATTTCTTTTTATTAACGCAGTCATTACACCACCAGCAGTTTCGATACCTAGTGATAAT 8429588 Query 183189 GGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATATCACTTAAAATT 183248 ||||| ||||||| || | || |||| | |||||||||| | ||||||| Sbjct 8429587 GGTGCAACATCTAATAGCAGTAGATCTTGTACAGCATCTGATTTATCGCCTGATAAAATT 8429528 Query 183249 GCAGCTTGAACAGCTGCACCATATGCAACAGC 183280 || ||||| || || |||||||| || ||||| Sbjct 8429527 GCTGCTTGCACTGCAGCACCATAAGCTACAGC 8429496 >seq136 Length=9508 Score = 131 bits (144), Expect = 5e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 |||||||| || |||||||||||||| ||||||||||||||||| || ||||| || || Sbjct 6187 CCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCC 6128 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || || | |||||| | ||||||||| | || | ||| || || || | Sbjct 6127 TTTACATTTTCGATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTGCCTGTCAAC 6068 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||||||||||| ||||| Sbjct 6067 ATTTTTACAAAAATTTGCAT 6048 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || | ||| ||||||||||||||||| || ||||||| ||||||||| ||| Sbjct 6501 CCTGCAAAAATAATACGCTGCTGATCAGGAGGAATGCCCTCTTTATTCTGAATTTTGGCT 6442 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 | |||||| || || | ||| | ||| || | || || | || || || || ||| Sbjct 6441 TCTACATTCTCGATAGCATCCGGGACTTCTACCTTTAGCGTTGCGGTTTTCCCAGTAAGT 6382 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| ||||||||||| Sbjct 6381 GTTTTATTGAAAATCTGCAT 6362 Score = 84.2 bits (92), Expect = 7e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 140604 AAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACA 140663 ||||| | || || ||||| | |||||||| |||| ||||||||||| | ||| ||| Sbjct 5791 AAGATCAAGCGCTGTTGATCTGATGGAATTCCCCCTTTGTCCTGAATTTTCGTTTTAACA 5732 Query 140664 TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTT 140723 || | || | |||||||| ||| | ||| | ||| | || || || || || ||||| Sbjct 5731 TTCTTGATGGTATCAGATGCTTCCATTTCCAATGTGATCGTTTTACCAGTAAGAGTTTTC 5672 Query 140724 ACAAAAATCTG 140734 |||||||| || Sbjct 5671 ACAAAAATTTG 5661 >seq4 Length=16644688 Score = 127 bits (140), Expect = 6e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || | || |||||||| ||||| || |||||||| |||||||| || ||| Sbjct 10332666 CCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTCGCT 10332725 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| ||||||| ||| || | ||| || ||||| |||| |||||| || |||| Sbjct 10332726 TTTACATTTTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATTGTCTTACCAGTTAAA 10332785 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || ||||| ||||| ||||| Sbjct 10332786 GTCTTTACGAAAATTTGCAT 10332805 Score = 120 bits (132), Expect = 9e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || ||||| || || |||||||| ||||| || || || || ||||||||||||||| Sbjct 3142843 TTACCTGCAAAAATAAGTCGTTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGAATTTTA 3142784 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | |||||| | ||| || ||||| |||| ||||| || || Sbjct 3142783 GCCTTCACATTCTCAATAGTATCAGACGATTCTACCTCAAGGGTAATCGTCTTGCCAGTC 3142724 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | |||||| || || || |||||| Sbjct 3142723 AATGTTTTCACGAATATTTGCATT 3142700 >seq100 Length=12629 Score = 100 bits (110), Expect = 9e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 140593 GTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTT 140652 |||| ||| |||| || |||| |||||||| | |||||||||||||| || ||||| Sbjct 6479 GTTTACCATCAAAAATAAGACACTGCTGATCTAGCGGAATTCCTTCTTTTTCTTGAATCC 6538 Query 140653 TAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712 | | |||||| | || || | |||||| | ||||||||| | || | ||| || || Sbjct 6539 TGTCCTTTACAATTTCGATTGTATCAGAAGTTTCAACTTCTAAAGTGATTGTTTTGCCCT 6598 Query 140713 TTAGTGTTTTTACAAAAATCTGCAT 140737 | | |||||||||||||| ||||| Sbjct 6599 TCAACGTTTTTACAAAAATTTGCAT 6623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241314831222