Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28]
674 sequences; 96,340,582 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2 188 2e-42
seq5 176 1e-38
seq136 131 5e-25
seq4 127 6e-24
seq100 100 9e-16
>seq2
Length=28345163
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| || ||||| || || |||||||||||||||||||| || | || || || ||
Sbjct 27365416 AGAACCAGGTGAAGCGTCGATTCTTTTTGAATATTATAATCCGACAGCGTACGACCGTCC 27365475
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| | |||||||| ||||||||||| ||||||||||| || ||||| || |||||||||
Sbjct 27365476 TCCAACTGTTTTCCGGCAAAGATTAGTCGTTGCTGATCCGGTGGAATGCCCTCTTTATCC 27365535
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|||||||| ||||||||||| || || | ||| || | ||| ||||| | || | ||
Sbjct 27365536 TGAATTTTGGCTTTTACATTCTCGATAGTATCCGAGGCTTCTACTTCCAACGTTATCGTT 27365595
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || ||||| ||||| |||||||||||
Sbjct 27365596 TTGCCAGTCAGTGTCTTTACGAAAATCTGCAT 27365627
Score = 149 bits (164), Expect = 2e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| |||||||||||| | |||||| | | ||||||||| |||||||| ||||||||| |
Sbjct 17914923 CCTGAAGAAATTTCAGCGATGGTTCTCGGTAAAATGAAAGAAATTGCGGAAGCATATCTT 17914982
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| || ||| | |||| ||| | || ||||| || || ||||||||||| || |||
Sbjct 17914983 GGAAAAGAAGTGAAACATGCAGTTGTCACAGTACCTGCTTACTTTAATGATGCACAACGT 17915042
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || |||||||| || | ||||| || | |||||| | | || || ||||||
Sbjct 17915043 CAAGCCACCAAAGATGCAGGTACTATTGCCGGCCTCAATGTTGTCCGTATCATCAATGAA 17915102
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746
|| ||||| || || || || |||||||| |||||
Sbjct 17915103 CCAACTGCAGCCGCTATCGCTTATGGGCTGGATAA 17915137
Score = 129 bits (142), Expect = 2e-24
Identities = 134/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799
||||||| ||| |||||||| ||||| || |||| ||| ||||||| ||| || ||| |
Sbjct 21358854 CCTCCAATCATCACAAAATCTGCTCCAGCACCAAGTGCCTTCGCAACATCGCCAGGATTT 21358913
Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859
| || || ||||| |||||||| ||||| || ||||| | ||||||||||| |||
Sbjct 21358914 GTGCATCCTCCATCGCTCATAACATGCCCATTCAAACCATGAGAAGCATCAGCACATTCT 21358973
Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAAC 130915
| | |||| ||||||||||| |||||||| | | ||| | || ||||||||
Sbjct 21358974 AATACAGCACTCAGTTGTGGATAACCAACTCCGGCTTTTTTCCGGGTCGTACAAAC 21359029
Score = 118 bits (130), Expect = 3e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| ||||| | || || || || || |||||||||||||| ||||| ||||| |||
Sbjct 27365806 CCAGCGAAGATCAATCGCTGTTGGTCCGGTGGAATTCCTTCTTTGTCCTGGATTTTCGCT 27365865
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| || || | |||||||| ||| ||||| | ||| | || || ||||| ||
Sbjct 27365866 TTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATCGTTTTACCGGTAAGA 27365925
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||||||||| || |||||
Sbjct 27365926 GTTTTTACAAAGATTTGCAT 27365945
Score = 113 bits (124), Expect = 1e-19
Identities = 109/140 (78%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
||||| || || | || |||||||| || |||||||| ||||| ||||| || || |||
Sbjct 27366326 CCAGCGAAAATCAATCGCTGCTGATCCGGTGGAATTCCCTCTTTGTCCTGGATCTTCGCT 27366385
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| || || || || | |||||||| ||| ||||| | ||| | ||| || || || ||
Sbjct 27366386 TTAACGTTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCAGTAAGA 27366445
Query 140718 GTTTTTACAAAAATCTGCAT 140737
|||||||||||||| |||||
Sbjct 27366446 GTTTTTACAAAAATTTGCAT 27366465
Score = 91.5 bits (100), Expect = 4e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228
|||| ||||| |||||| || ||||||| | ||| | ||||| || || || ||
Sbjct 20169240 TTTCGCACAGTACCATCATAACTGACCATTACACTTTCCATAGCTTTGATCAGCCGACGT 20169299
Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288
||| |||||||||| ||||| || |||||||| || | || |||| ||||||
Sbjct 20169300 TGAATGTAACCAGTTTCTGCTGTTTTTACAGCAGTATCGATAAGGCCTTCACGGCCACCC 20169359
Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348
|||||||| ||||| || || | ||||| || || | | | ||||| | || | |||
Sbjct 20169360 ATTGCATGAAAGAAGAACTCGGACGGAGTCAGCCCTGCTAGATATGAATTTTCGACAAAA 20169419
Query 378349 CCT 378351
|||
Sbjct 20169420 CCT 20169422
Score = 87.8 bits (96), Expect = 5e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 349766 AATATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825
||||||||| | |||||| | || ||||| ||||||||||| || || | || ||||
Sbjct 17915416 AATATTCTTGTATTTGATCTTGGCGGTGGAACTTTTGATGTGTCGATATTGACGATTGAT 17915475
Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885
| || |||| ||||| ||| || |||||||| ||| | ||||| |||||||||
Sbjct 17915476 AATGGTGTTTTCGAAGTACTAGCTACCAACGGTGATACTCATTTGGGTGGTGAAGATTTT 17915535
Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
||| | || | | |||||| |||||| ||| ||
Sbjct 17915536 GATCAGCGAGTTATGGAGCATTTCATTAAAGTATTCAA 17915573
>seq5
Length=16048563
Score = 176 bits (194), Expect = 1e-38
Identities = 197/261 (75%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 349478 GGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGA 349536
|||| |||||||| | |||||||||| || || || || ||||| | | || ||
Sbjct 8433384 GGTGGTAAACCAAAAGTGCAGGTTGAATACAAGGGCGAGACGAAAACCTTCACT-CCAGA 8433442
Query 349537 AGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGA 349596
||||||||||||||||||||| |||||||||||||||| |||||||||| | | ||| |
Sbjct 8433443 AGAAATTTCATCAATGGTTTTGGTTAAAATGAAGGAAACGGCTGAAGCATTTCTTGGTCA 8433502
Query 349597 AACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGC 349656
|||| | ||||||||| | || || ||||| ||||| ||||| | ||||| ||
Sbjct 8433503 TGCAGTCAAGGATGCTGTTGTCACAGTCCCAGCATATTTCAATGACTCACAGCGACAAGC 8433562
Query 349657 AACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCAC 349716
||| |||||| |||| || || || ||||||| || |||| || |||||||| ||
Sbjct 8433563 AACTAAAGATTCTGGTGCAATCGCTGGTCTAAATGTCCTGCGAATTATCAATGAACCAAC 8433622
Query 349717 TGCTGCAGCAATTGCATATGG 349737
|| || || ||||| |||||
Sbjct 8433623 AGCAGCCGCTATTGCCTATGG 8433643
Score = 116 bits (128), Expect = 1e-20
Identities = 191/275 (69%), Gaps = 3/275 (1%)
Strand=Plus/Plus
Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564
|||| || | |||||||||||||||| || ||||| |||||| ||||| ||||
Sbjct 8434949 TTCAGGTTTATGAAGGTGAACGTGCTATGACGAAAGACAATAATCTGCTTGGTAAATTCG 8435008
Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624
| || |||||| || ||| | || || || || ||||||||| | |||||||
Sbjct 8435009 AATTGTCTGGAATTCCGCCTGCTCCTCGCGGTGTGCCGCAAATTGAAGTCACATTCGATA 8435068
Query 350625 TTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTA 350684
|||| | ||||||||||| |||||| ||||| || ||||||| || ||| | |
Sbjct 8435069 TTGACGCGAATGGTATTTTGAATGTTTCCGCACAAGATAAATCAACAGGAAAACAGAACA 8435128
Query 350685 AGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACAC 350744
|| | |||||| ||||| ||| | | ||||| || || |||||| |||| ||
Sbjct 8435129 AGATTACAATTACCAATGACAAAGGACGTTTGTCAAAGGATGAGATTGAGCGAATGGTAC 8435188
Query 350745 AAGATGCCGAATCATATGCTAAGGAAGATGAAGAA 350779
| || || || ||| ||||| ||||| |||
Sbjct 8435189 AGGAAGCTGAGAAATA---TAAGGCGGATGATGAA 8435220
Score = 111 bits (122), Expect = 5e-19
Identities = 211/311 (68%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 182753 TTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGCATACTT 182812
||| ||| |||||| || |||||| |||| | | ||||| || ||| ||
Sbjct 8435259 TTCGAGAGCATTTTTCGCTGCAATACGATCTTTCTGTGCTTCATCATCCGCCTTATATTT 8435200
Query 182813 TTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGT 182872
||||| ||| | ||||| || || ||||| || || | | | ||| ||||| ||
Sbjct 8435199 CTCAGCTTCCTGTACCATTCGCTCAATCTCATCCTTTGACAAACGTCCTTTGTCATTGGT 8435140
Query 182873 AATTACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACC 182932
|||| | || | | ||| |||||||| || ||||| |||||| ||||||||
Sbjct 8435139 AATTGTAATCTTGTTCTGTTTTCCTGTTGATTTATCTTGTGCGGAAACATTCAAAATACC 8435080
Query 182933 ATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAAT 182992
||| | ||||| ||| |||| |||||||| || || ||||| || || || |||||
Sbjct 8435079 ATTCGCGTCAATATCGAATGTGACTTCAATTTGCGGCACACCGCGAGGAGCAGGCGGAAT 8435020
Query 182993 TCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTC 183052
||||| || |||| ||| | |||||| ||||| || | || | || |||||
Sbjct 8435019 TCCAGACAATTCGAATTTACCAAGCAGATTATTGTCTTTCGTCATAGCACGTTCACCTTC 8434960
Query 183053 ATATACTTGAA 183063
||| || ||||
Sbjct 8434959 ATAAACCTGAA 8434949
Score = 107 bits (118), Expect = 6e-18
Identities = 178/257 (69%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
|||||||||||||| || || || | || || | | ||| || || || ||
Sbjct 8429128 ATTGAAATTGATTCACTCTTCGACGGTACTGACTTTTACACTAGTATCACCCGAGCCCGT 8429187
Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149
|||||||| | ||| ||| | || | |||| |||||||| || || |||| |||
Sbjct 8429188 TTTGAAGAGCTTTGTGCTGATTTGTTCCGTTCAACCATGGATCCCGTTGAGAAAGCATTG 8429247
Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209
||||| || ||| ||| ||| || |||| | ||||| ||||| ||||||||
Sbjct 8429248 CGTGATGCTAAGATGGATAAAGCTCAAATGCATGATATTGTTTTGGTTGGCGGTTCTACT 8429307
Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269
|||||||||||||| ||| | || || || || || ||| ||| ||||||| | |
Sbjct 8429308 CGTATTCCAAAAGTACAAAAATTGCTCTCCGATTTCTTTTCTGGAAAAGAACTGAACAAA 8429367
Query 350270 TCAATTAATCCAGATGA 350286
||||||||||||||
Sbjct 8429368 AGCATTAATCCAGATGA 8429384
Score = 107 bits (118), Expect = 6e-18
Identities = 182/259 (70%), Gaps = 6/259 (2%)
Strand=Plus/Minus
Query 182808 TACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCA 182867
|||||||| || ||| ||||||||| |||||||| || || | | | ||| ||||
Sbjct 8430073 TACTTTTCGGCTTCCGCAACCATTCTTTCGATTTCATCCTTCGACAAACGTCCTTTATCA 8430014
Query 182868 TTTGTAATTACTACATTACTA-GTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAA 182926
|| |||||| | ||| || | | | ||||| ||||| || |||| |||||||
Sbjct 8430013 TTAGTAATTGTAATCTTATTATGCTTC-CCAGTGGATTTATCCTGTGCTGAGACATTTAG 8429955
Query 182927 AATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGG 182986
|||||| || | || | |||||| | ||||| || ||||||||||| || || ||
Sbjct 8429954 AATACCGTTTGCATCGATATCAAAAGTGACTTCGATTTGTGGAACACCACGAGGAGCAGG 8429895
Query 182987 TGGAATTCCAGTTAAAGT--AAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTC 183044
|||||||||| ||||| |||| ||| || ||||||||| | || | || |
Sbjct 8429894 CGGAATTCCAG--AAAGTTCGAATTTACCCAACAAGTTATTATCTCTCGTCATCGCACGT 8429837
Query 183045 TCGCCTTCATATACTTGAA 183063
|| ||||| || || ||||
Sbjct 8429836 TCACCTTCGTAAACCTGAA 8429818
Score = 104 bits (114), Expect = 7e-17
Identities = 181/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 350029 TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087
||| || ||||||||| ||| | || || | ||||| | || ||||| ||||| |
Sbjct 8434221 TATCGAGATTGATTCT-TTGTTCGAGGGGATCGATTTTTACACAAACATTACGCGTGCCC 8434279
Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147
| ||||||||| ||||| ||| | || | |||| |||||||| || || |||| ||
Sbjct 8434280 GTTTTGAAGAACTATGTGCTGATTTGTTCCGCTCAACCATGGATCCGGTTGAGAAAGCAT 8434339
Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207
| || || || ||| ||| ||| || |||| | || |||| ||||| || |
Sbjct 8434340 TGCGTGACGCCAAGATGGATAAAGCTCAAGTTCATGACATTGTACTAGTAGGTGGATCAA 8434399
Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267
| |||||||| ||||| || | | || || || || || ||||||||||| ||
Sbjct 8434400 CGCGTATTCCGAAAGTACAGAAACTTCTCTCAGATTTCTTCTCTGGCAAAGAACTGAATA 8434459
Query 350268 GATCAATTAATCCAGATGAAG 350288
| ||||||||||||||||
Sbjct 8434460 AAAGTATTAATCCAGATGAAG 8434480
Score = 102 bits (112), Expect = 2e-16
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829
||||||| |||||| | |||||||||||||| |||||||| | ||||| |||| || |
Sbjct 8433778 TTCTTATCTTTGATCTTGGTGGTGGTACTTTCGATGTATCTATCCTAACCATTGAGGACG 8433837
Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875
| ||||| ||||| ||| | || |||||||| || |||||||| ||
Sbjct 8433838 GTATTTTCGAAGTAAAATCTACGGCTGGTGACACTCATCTTGGAGG 8433883
Score = 98.7 bits (108), Expect = 3e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666
||||| || | ||||||||||| ||||| |||||| | || || ||||| ||||||
Sbjct 8428196 GATGCCGTAGTAACTGTACCAGCGTATTTCAATGATTCTCAACGACAAGCAACCAAAGAT 8428255
Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726
|| || |||| | || | ||||| || |||| || || || || |||||||| ||
Sbjct 8428256 GCGGGTGCCATTTCTGGCCTGAATGTCCTTCGAATCATCAACGAGCCAACTGCTGCTGCT 8428315
Query 349727 ATTGCATATGGGCTTGATAAAA 349748
||||||||||| || |||||||
Sbjct 8428316 ATTGCATATGGTCTAGATAAAA 8428337
Score = 98.7 bits (108), Expect = 3e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341
||||||| ||||||| |||||||| || ||||||||||| ||||| || | ||||||||
Sbjct 8432923 AGGTAACCGAACAACACCATCATATGTGGCATTTACCGACACTGAACGCCTTATTGGTGA 8432982
Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388
| | || |||||||| | ||| |||||| | ||||| |||||||
Sbjct 8432983 TGCGGCCAAAAATCAGGTTGCAATGAATCCACATAATACTGTTTTTG 8433029
Score = 96.9 bits (106), Expect = 1e-14
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
||||||||| | ||||| || ||||||||||| ||| | |||| |||| || || |||
Sbjct 8428519 ATTTTTGATCTTGGTGGAGGCACTTTTGATGTGTCAATTTTAACTATTGAGGATGGTATT 8428578
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875
|||||||| ||| |||| ||||| ||||| |||||||| ||
Sbjct 8428579 TTTGAAGTAAAATCAACCGCTGGAGATACTCATCTTGGAGG 8428619
Score = 93.3 bits (102), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 10/229 (4%)
Strand=Plus/Plus
Query 350288 GCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG----AAATAAGA-GTT 350342
||||| || ||||||||||| || || ||| | |||||||| || |||| ||| | |
Sbjct 8429496 GCTGTAGCTTATGGTGCTGCAGTGCAAGCAGCAATTTTATCAGGCGATAAATCAGATGCT 8429555
Query 350343 CTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTT 350402
|| || |||||| | ||| ||||||| | ||| | || || || | ||||||
Sbjct 8429556 GTACAA-----GATCTACTGCTATTAGATGTTGCACCATTATCACTAGGTATCGAAACTG 8429610
Query 350403 CTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCC 350462
|||||| |||||||||| | || ||||||| || | || ||||||| || |
Sbjct 8429611 CTGGTGGTGTAATGACTGCGTTAATAAAAAGAAATACAACCATTCCAACAAAAACATCGC 8429670
Query 350463 AAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511
| || || |||| | | | |||||||| |||| ||| || |||||
Sbjct 8429671 AGACATTCACTACCTATTCCGATAATCAACCAGGAGTATTGATCCAAGT 8429719
Score = 91.5 bits (100), Expect = 4e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564
|||| || | |||||||||||||| || | ||||||||| | || ||||
Sbjct 8429818 TTCAGGTTTACGAAGGTGAACGTGCGATGACGAGAGATAATAACTTGTTGGGTAAATTCG 8429877
Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624
|| || |||||| || ||| | || ||||| || || |||||| |||| ||||
Sbjct 8429878 AACTTTCTGGAATTCCGCCTGCTCCTCGTGGTGTTCCACAAATCGAAGTCACTTTTGATA 8429937
Query 350625 TTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTA 350684
| ||| |||| |||||| ||||||| | ||| || ||||| | ||| || || ||
Sbjct 8429938 TCGATGCAAACGGTATTCTAAATGTCTCAGCACAGGATAAATCCACTGGGAAGCATAATA 8429997
Query 350685 AGGTAGAAATTACTAATGATAAA 350707
|| | ||||||||||||||||
Sbjct 8429998 AGATTACAATTACTAATGATAAA 8430020
Score = 86.0 bits (94), Expect = 2e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 183069 ACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTT 183128
||| |||| |||||||| ||| |||| || ||| | | || | ||||| |||
Sbjct 8429707 ACTCCTGGTTGATTATCGGAATAGGTAGTGAATGTCTGCGATGTTTTTGTTGGAATGGTT 8429648
Query 183129 GAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAAT 183188
| ||||| | | |||||||||| | | |||||||| | |||| |||||||
Sbjct 8429647 GTATTTCTTTTTATTAACGCAGTCATTACACCACCAGCAGTTTCGATACCTAGTGATAAT 8429588
Query 183189 GGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATATCACTTAAAATT 183248
||||| ||||||| || | || |||| | |||||||||| | |||||||
Sbjct 8429587 GGTGCAACATCTAATAGCAGTAGATCTTGTACAGCATCTGATTTATCGCCTGATAAAATT 8429528
Query 183249 GCAGCTTGAACAGCTGCACCATATGCAACAGC 183280
|| ||||| || || |||||||| || |||||
Sbjct 8429527 GCTGCTTGCACTGCAGCACCATAAGCTACAGC 8429496
>seq136
Length=9508
Score = 131 bits (144), Expect = 5e-25
Identities = 113/140 (81%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| ||||||||||||||||| || ||||| || ||
Sbjct 6187 CCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCC 6128
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||| | ||||||||| | || | ||| || || || |
Sbjct 6127 TTTACATTTTCGATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTGCCTGTCAAC 6068
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||||||||||| |||||
Sbjct 6067 ATTTTTACAAAAATTTGCAT 6048
Score = 95.1 bits (104), Expect = 4e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|| ||||| || | ||| ||||||||||||||||| || ||||||| ||||||||| |||
Sbjct 6501 CCTGCAAAAATAATACGCTGCTGATCAGGAGGAATGCCCTCTTTATTCTGAATTTTGGCT 6442
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
| |||||| || || | ||| | ||| || | || || | || || || || |||
Sbjct 6441 TCTACATTCTCGATAGCATCCGGGACTTCTACCTTTAGCGTTGCGGTTTTCCCAGTAAGT 6382
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||| |||||||||||
Sbjct 6381 GTTTTATTGAAAATCTGCAT 6362
Score = 84.2 bits (92), Expect = 7e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 140604 AAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACA 140663
||||| | || || ||||| | |||||||| |||| ||||||||||| | ||| |||
Sbjct 5791 AAGATCAAGCGCTGTTGATCTGATGGAATTCCCCCTTTGTCCTGAATTTTCGTTTTAACA 5732
Query 140664 TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTT 140723
|| | || | |||||||| ||| | ||| | ||| | || || || || || |||||
Sbjct 5731 TTCTTGATGGTATCAGATGCTTCCATTTCCAATGTGATCGTTTTACCAGTAAGAGTTTTC 5672
Query 140724 ACAAAAATCTG 140734
|||||||| ||
Sbjct 5671 ACAAAAATTTG 5661
>seq4
Length=16644688
Score = 127 bits (140), Expect = 6e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|| ||||| || | || |||||||| ||||| || |||||||| |||||||| || |||
Sbjct 10332666 CCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGAATCTTCGCT 10332725
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| ||||||| ||| || | ||| || ||||| |||| |||||| || ||||
Sbjct 10332726 TTTACATTTTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATTGTCTTACCAGTTAAA 10332785
Query 140718 GTTTTTACAAAAATCTGCAT 140737
|| ||||| ||||| |||||
Sbjct 10332786 GTCTTTACGAAAATTTGCAT 10332805
Score = 120 bits (132), Expect = 9e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || ||||| || || |||||||| ||||| || || || || |||||||||||||||
Sbjct 3142843 TTACCTGCAAAAATAAGTCGTTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGAATTTTA 3142784
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|| || ||||| ||||| | |||||| | ||| || ||||| |||| ||||| || ||
Sbjct 3142783 GCCTTCACATTCTCAATAGTATCAGACGATTCTACCTCAAGGGTAATCGTCTTGCCAGTC 3142724
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
| |||||| || || || ||||||
Sbjct 3142723 AATGTTTTCACGAATATTTGCATT 3142700
>seq100
Length=12629
Score = 100 bits (110), Expect = 9e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 140593 GTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTT 140652
|||| ||| |||| || |||| |||||||| | |||||||||||||| || |||||
Sbjct 6479 GTTTACCATCAAAAATAAGACACTGCTGATCTAGCGGAATTCCTTCTTTTTCTTGAATCC 6538
Query 140653 TAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712
| | |||||| | || || | |||||| | ||||||||| | || | ||| || ||
Sbjct 6539 TGTCCTTTACAATTTCGATTGTATCAGAAGTTTCAACTTCTAAAGTGATTGTTTTGCCCT 6598
Query 140713 TTAGTGTTTTTACAAAAATCTGCAT 140737
| | |||||||||||||| |||||
Sbjct 6599 TCAACGTTTTTACAAAAATTTGCAT 6623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515241314831222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |