Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5384 87.8 2e-12 >seq5384 Length=661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || ||||| ||||| |||||||| | || ||||| ||| | Sbjct 405 AATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTTTGGAAGTCGAGGCCTC 346 Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | ||||| | |||| || || | ||||| ||||||||||| | || | Sbjct 345 GGACACCATCGAAAACG-TGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCCGATC 287 Query 40808 AGCAACGACTCATCTACGCGGG 40829 |||| || || |||| ||| || Sbjct 286 AGCAGCGTCTGATCTTCGCTGG 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515145929389520