Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq9716 165 3e-36 >seq9716 Length=6568 Score = 165 bits (182), Expect = 3e-36 Identities = 190/252 (75%), Gaps = 3/252 (1%) Strand=Plus/Minus Query 3752 GGTGTCACGGCAAAACGCATTGCTGGCGCTCTGCGCTCCATCGGCAACGATGTCGATGTG 3811 || ||||| || || ||||| | | ||| |||||| ||||||| || || |||||| Sbjct 6000 GGCGTCACCGCCAAGCGCATCGGCGCCGCGCTGCGCAACATCGGCG-CGC-GT-GATGTG 5944 Query 3812 ACCGTGAACATCAACAGCCCCGGCGGCGACGTATTCGAAGGCCTGGCCATTTACAACCTG 3871 || |||||| ||||| ||| ||||||||| | ||||| ||| ||||||| ||||||||| Sbjct 5943 ACGGTGAACCTCAACTCCCCGGGCGGCGACTTCTTCGAGGGCATGGCCATCTACAACCTG 5884 Query 3872 CTGCGCGAGCACAAGGGCAAGGTCACGGTGAACATCATCGGCCTGGCTGCCTCTGCCGCC 3931 |||||||||||||||| |||||| || | | | | ||| |||| ||||| | || Sbjct 5883 CTGCGCGAGCACAAGGCCAAGGTGACCATCCGCGTGCTGGGCGTGGCCGCCTCGGTGGCT 5824 Query 3932 TCTTTCATCGCCATGGCGGGGGATGAAATCCGCATCGGCCGCGCCGCCTTCCTGATGATC 3991 || | || |||||||| || || || |||| || || | | | |||||||||||| Sbjct 5823 TCGGTGATTGCCATGGCCGGCGACGAGATCCTGATGGGTGATGGCTCGTTCCTGATGATC 5764 Query 3992 CATAACGCCTGG 4003 || ||||||||| Sbjct 5763 CACAACGCCTGG 5752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180417222001512