Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5384 82.4 7e-11 >seq5384 Length=661 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || ||||| || ||||| | || || || | || Sbjct 404 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTTTGGAAGTCGAGGCCTCG 345 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| || || | || ||||||||| ||| | || ||||| ||| Sbjct 344 GACACCATCGAAAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 285 Query 31313 CAGCGTCTAATATTCGCTGG 31332 |||||||| || |||||||| Sbjct 284 CAGCGTCTGATCTTCGCTGG 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445703006445840