Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq2457 89.7 8e-13 >seq2457 Length=3961 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 70975 TGTGAGCATCACATCGTAACAATCGACGGCTTTGCCACTGTCGCATACATTCCGAAGAAC 71034 || || || ||| | || || ||||||||| || || || ||||| || ||||| | Sbjct 91 TGCGAACACCACTTTGTCACTATCGACGGCAAAGCGACGGTGGCATATATCCCGAAAGAT 150 Query 71035 AAAGTTCTTGGTCTGTCGAAAATGAATCGCATCGTTGAGTACTTCGCTCGTCGTCCGCAG 71094 || ||||||||||||| || |||||||| || ||| ||| || | ||||||||| Sbjct 151 TCGGTCATTGGTCTGTCGAAGATTAATCGCATTGTGCAGTTCTTTGCACAGCGTCCGCAG 210 Query 71095 ATTCAAGAACGTCTGACTGTTCAAATCGCTGA-AGCACTGAAGTTCATTCTTGAAACTGA 71153 |||| |||||| |||| |||||| || | || ||| | | || | ||| | Sbjct 211 GTTCAGGAACGTTTGACCCAGCAAATC-CTCACCGCGCTGCAAACGCTGCTCGGAACCAA 269 Query 71154 AGACGTAGCGGTATTGATCGACGCCAAACACTATTGCGTGAAAGCACGCGG 71204 | || ||||| | ||| || || ||| || || |||||||| ||||| Sbjct 270 TAATGTGGCGGTGTCGATTGATGCGGTACATTACTGTGTGAAAGCGCGCGG 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783229399146480