Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq11243 98.7 2e-15 seq10831 98.7 2e-15 seq8086 98.7 2e-15 seq7784 98.7 2e-15 seq7109 98.7 2e-15 seq6207 98.7 2e-15 seq4952 98.7 2e-15 seq3532 98.7 2e-15 seq1275 98.7 2e-15 seq10536 95.1 2e-14 seq8823 95.1 2e-14 seq8053 89.7 1e-12 seq8326 86.0 1e-11 >seq11243 Length=2799 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 2717 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 2776 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2777 CCCGCATCGGGC 2788 >seq10831 Length=4251 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 1638 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1697 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1698 CCCGCATCGGGC 1709 >seq8086 Length=7711 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 7707 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 7648 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 7647 CCCGCATCGGGC 7636 >seq7784 Length=3719 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 1706 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1765 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1766 CCCGCATCGGGC 1777 >seq7109 Length=3587 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 3505 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 3564 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 3565 CCCGCATCGGGC 3576 >seq6207 Length=9077 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 1519 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1578 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1579 CCCGCATCGGGC 1590 >seq4952 Length=1793 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 577 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 518 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 517 CCCGCATCGGGC 506 >seq3532 Length=5108 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 300 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 241 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 240 CCCGCATCGGGC 229 >seq1275 Length=2295 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 771 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 830 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 831 CCCGCATCGGGC 842 >seq10536 Length=3149 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||||||||| |||| | ||||||||||||| | |||| |||||||||| Sbjct 3094 GCCCGGTTAGCTCAGTCGGTTGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 3035 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 3034 CCCGCATCGGGC 3023 >seq8823 Length=5460 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||| ||| | ||||||||||||| | |||| |||||||||| Sbjct 5405 GCCCGGTTAGCTCAGTCGGTACAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 5346 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 5345 CCCGCATCGGGC 5334 >seq8053 Length=10906 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| ||| |||||| Sbjct 51 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGCTCGAGC 110 Query 142564 CCCACATCGGGC 142575 ||| || ||||| Sbjct 111 CCCGCAGCGGGC 122 >seq8326 Length=7857 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | || |||||||||| | ||| ||||| |||| Sbjct 159 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGTCTCTTAATCTGGCTGTCTCGGGTTTGAGC 100 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 99 CCCGCATCGGGC 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027686974478057