Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6360 82.4 8e-11 seq3446 82.4 8e-11 >seq6360 Length=2026 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 517 ATGCAAAACATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 576 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||||||| Sbjct 577 TACTCACCACTATACTACCGAGGAT 601 >seq3446 Length=4969 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 238 AAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 297 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 298 CACCACTATACTACCGAGGA 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543135548349680