Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq912 86.0 6e-12 >seq912 Length=596 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || |||||| |||| ||||||||| | Sbjct 227 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACCCTCGAGGTCGAGGCCTCT 286 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || |||||||||||| | || || Sbjct 287 GACACGATCGAGAACG-TGAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCTGATCA 345 Query 38363 ACAGCGGCTCATTTACGCGGG 38383 ||||| ||||||| ||| || Sbjct 346 GCAGCGTCTCATTTTCGCCGG 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500101669175680