Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7160 264 1e-65 >seq7160 Length=7141 Score = 264 bits (292), Expect = 1e-65 Identities = 549/815 (67%), Gaps = 2/815 (0%) Strand=Plus/Minus Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||| | || || ||| || | |||||| || ||||| | ||||| | ||| | Sbjct 5320 GGTCATGACTCCTCCGGCAGTCTCTATTCCAAGGGAAAGAGGGGCGACGTCGAGGAGAAG 5261 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 ||| || || || | || | || || | | |||||||| ||||| | || || Sbjct 5260 CAGATCCTGGACGGCCTCAGACTTGTCTCCAGACAGAATGGCGGCCTGGACGGCAGCTCC 5201 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 || || || ||||| |||||||| |||| || |||||||| || ||| || || Sbjct 5200 ATAGGCAACAGCCTCGTCGGGGTTGATCGACTTGTTCAGTTCCTTGCCGGAGAACAGGTC 5141 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 || | || | || | || ||||| || || ||||| ||||| | |||||| || | Sbjct 5140 GGACAGCAGCTTCTGGACCTTGGGGATACGAGTGGATCCGCCGACAAGAACGATGTCGTG 5081 Query 7165 CACTTTCGAT-TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | | | | | || || ||||| | ||| || | | || ||||| || ||||| | Sbjct 5080 GA-TCTGGCTCTTGTCCATCTTGGCGTCGCGGATGGCCTTCTCGACGGGGTCCATGGTGT 5022 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | ||||||| || || || ||||| ||||| |||||||| ||| || ||||| | Sbjct 5021 TGCGGAACAGATCGGCGCAGAGCTCCTCGAAACGGGCACGGGTGATGTTGGTGTAGAAGT 4962 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 | | || ||| | | ||| || || || || | | || | | ||| || | || | Sbjct 4961 CGATTCCCTCGAAGAGCGAGTCGATCTCGATCGACGCCTGGGAAGACGACGACAGGGTGC 4902 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| ||||||||||| || || || | ||||| |||||||| ||||| || || | Sbjct 4901 GCTTGGCGCGCTCACAGGCAGTGCGCAGGCGACGCAGGGCACGAGGGTTGGAGGCAAGGT 4842 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 | ||||| || || | || ||||| | |||||| | | ||| ||||| | Sbjct 4841 CCTTCTTGTGCTTCCTCTTGAACTCGGCGACGAAGTGGTTGACCAATCTGTTGTCGAAGT 4782 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | || || |||||||| || || || || |||| |||||||| ||||| || | || | Sbjct 4781 CCTCTCCTCCCAAGTGAGTGTCTCCAGCAGTCGACTTGACTTCGAAGATTCCGTCCTCGA 4722 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | || ||||| || ||||| || || || || || ||||| ||||| | Sbjct 4721 TGGTCAGGATGGACACATCGAAGGTACCGCCTCCAAGATCGAAGATGAGGACGTTGCGCT 4662 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | || || ||||| || | ||||| ||||| || ||||| || || || || || | Sbjct 4661 CTCCGGCTCCCTTCTTGTCCAATCCGTAGGCGATGGCGGCCGCGGTAGGCTCGTTGATGA 4602 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 | || ||| ||| || |||| || | | | || || || || || || || || || | Sbjct 4601 TGCGCAGAACGTTGAGTCCAGAGATGGCTCCGGCGTCCTTGGTAGCCTGACGCTGGGAGT 4542 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 |||| ||||| ||||| || || ||||| |||||| Sbjct 4541 CGTTGAAGTAAGCCGGAACGGTAACGACGGCGTCC 4507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635042476176680