Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq9459 497 3e-136 >seq9459 Length=5878 Score = 497 bits (550), Expect = 3e-136 Identities = 391/467 (84%), Gaps = 1/467 (0%) Strand=Plus/Plus Query 28747 GTCATGGGTTAGTCCTTCACAAAAATAATCCAGTGGGTTTTATCGTTCTTGCCGGTGCGC 28806 ||||||||||||||||||||||| ||||||||||| ||||||| ||| || ||||| || Sbjct 3 GTCATGGGTTAGTCCTTCACAAAGATAATCCAGTGAGTTTTATTGTTTTTCCCGGTACGT 62 Query 28807 TGGCCAATAATTGGTTTTACGTCCGTCAGCGCCAGAATCTGGCTTACCGGAATCTGCGTT 28866 || ||||| ||| || |||| || ||||||||||||||||||||||| ||||||||| Sbjct 63 TGACCAATTGCTGGCTTCGCGTCAGTAAGCGCCAGAATCTGGCTTACCGGGATCTGCGTT 122 Query 28867 TCGTTCCACTTGAAAATGAGAACACCGTGTGGCCGCAATACGCGGAATGCCTCTTTGAAT 28926 |||||||| ||||| ||||| || || ||||||| ||| || ||| |||||||||||| Sbjct 123 TCGTTCCATTTGAAGATGAGCACGCCATGTGGCCACAACACCATGAACGCCTCTTTGAAT 182 Query 28927 CCGGCGCGGAGGTCAGAACGCCATGTTTTTTA-TTCAGGCGTCCGTATTTTTTACCCATC 28985 |||||||| | || | |||||| ||||||| |||| || ||||| |||||||||||| Sbjct 183 CCGGCGCGTAAATCTGTACGCCACGTTTTTTTGTTCAATCGCCCGTACTTTTTACCCATC 242 Query 28986 CAGGCGTTATCACCAACTCGCTCAAGATGCGGAGGGTCAAACACCACAACCGGAAAAGAA 29045 ||||| | || || || || || ||||| ||||||||||||||||||||||||||| Sbjct 243 CAGGCAGACTGGCCCACGCGTTCCAGGTGCGGCGGGTCAAACACCACAACCGGAAAAGAA 302 Query 29046 GAATCAGCGAACGGCAGTGAACGAAAGTCGGCAATGAGGTCAGGACTGATAACCAGGCTG 29105 |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| | | Sbjct 303 GAATCAGCGAACGGCAATGAACGAAAGTCGGCAATCAGGTCTGGACTGATAACCAGACGG 362 Query 29106 CGACCGTCGCACAATATATGCTCCTCGTCGCGGATATCGGCGAATACGGCGCGTTCATCG 29165 ||||||||||||| | ||||| ||| |||||||||| | ||| |||||||| || Sbjct 363 CGACCGTCGCACAGTTCGTGCTCTTCGGCGCGGATATCAGTGAACACGGCGCGGGTGTCC 422 Query 29166 CGCTTATTAAACCAGAACATGCGCGAGCCGCAGCACATATCCAGAAT 29212 |||| || |||||||||||||| ||||||||||||||||| ||||| Sbjct 423 TGCTTGTTGAACCAGAACATGCGGGAGCCGCAGCACATATCAAGAAT 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157028382304572