Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq4798 86.0 2e-12 >seq4798 Length=3577 Score = 86.0 bits (94), Expect = 2e-12 Identities = 190/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 12147 CCTGGCGTGCAGTCGCGCGCCAAAGGCTCGCATATTCCGCTGGTGCTGCCGGTCGAGTAT 12206 || ||| |||||||| ||||| || ||||||||||| ||||||| |||||| || || Sbjct 1072 CCGGGCAAGCAGTCGCATGCCAAGGGTTCGCATATTCCCCTGGTGCAGCCGGTTGAATAC 1013 Query 12207 GCCACCGCAAGCTGGCGGCGCGCCTTGCTGGCGCTGGAGCCACACGAAACCGCCTGGCTA 12266 |||||||| ||||| ||||| || || | || || |||| | | || ||||| Sbjct 1012 TCCACCGCATCGTGGCGCCGCGCACTGATGTCACTCGAAGAACACCAGAAAGCGTGGCTG 953 Query 12267 ATGTGGTGCTATGCCGATGCCACTCGTTACGCCCACCAGGTAGAGATCGTGCGCTGGGGC 12326 | ||| |||| ||| | || | | | ||||| || ||| | ||||| Sbjct 952 CTATGGAACTATAGCGAGAACGTGCGCTGGTGCTATCAGGTGGAAATCACTCAATGGGGG 893 Query 12327 TGGGAGGCATTCAGCGATCAACTGGCGGGGAAACGCATTGCAGCCAAAACGCTGGCACGC 12386 ||| | |||||| | |||||||| || || | | ||| || || | | || Sbjct 892 TGGCAACAGTTCAGCCAGCAACTGGCCGGAAAGAGGGTGGCAAAGAAGACTATCGACCGG 833 Query 12387 CTGCGCGCGCTGGTATGGCTTGCGGCGCAGGACGTTAAACGAGAA 12431 |||| ||| | |||||||| |||||||| || ||| | ||| Sbjct 832 TTGCGTCAGCTAATCTGGCTTGCTGCGCAGGATGTGAAAGGCGAA 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127777934628864