Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq7475 87.8 2e-12 >seq7475 Length=18404 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 39621 CCAGACGATCGCGGGATCATCGTTTCCGCATGGAACCCTGTTGATCTGGATGATATGGCT 39680 || ||| |||| | ||||||||||||||||||||| | || |||||| | ||||| Sbjct 17120 CCGGACTCTCGCCGTATCATCGTTTCCGCATGGAACGTCGGCGAGCTGGATAAAATGGCG 17061 Query 39681 CTGCGTCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAG 39740 ||| ||||| || ||||||||||| |||| | || || || || || Sbjct 17060 CTGGCGCCGTGCCATGCGTTCTTCCAGTTTTACGTAGCGGATGGCAAGCTCTCCTGCCAA 17001 Query 39741 TGGTATCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCT 39800 |||||||||||| ||||| ||| | || |||||||| || || ||| |||| | Sbjct 17000 CTGTATCAGCGTTCGTGCGATGTGTTCCTCGGCTTGCCGTTTAACATTGCCAGCTACTCC 16941 Query 39801 CTCCTGACGCATATTATCGCTGATATTTGCGGGTATGAAGTGGGCGATCTGGTTTGGACT 39860 || || ||| || || || | |||| |||||||| ||| | || ||||| Sbjct 16940 CTGTTGGTGCACATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTGATTTTGTCTGGACC 16881 Query 39861 GGCGGTGA 39868 || || || Sbjct 16880 GGTGGCGA 16873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570008526132760